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71_008_scaffold_393_2

Organism: 71_008_Negativicoccus_succinicivorans_52_9

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(548..1405)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivo similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 285.0
  • Bit_score: 568
  • Evalue 4.70e-159
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 291.0
  • Bit_score: 236
  • Evalue 9.50e-60
UPI0003D67FB2 related cluster n=1 Tax=unknown RepID=UPI0003D67FB2 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 285.0
  • Bit_score: 568
  • Evalue 3.30e-159

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Taxonomy

Negativicoccus succinicivorans → Negativicoccus → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 858
ATGCAGGGAATCATTAATGTACTGAAGCCGGCCGGCATGACGTCACATGATGTCATTTACGTTTTGCGAAAGATTTACGGCATTCGTAAAATGGGCCACTCCGGTACGTTGGATCCTTTAGCCGCGGGCGTTTTGCCGGTATTTCTGGGCAAAGCGACGCGGCTTTTGGCATGGGCGCCGACAGAGCCGAAAGTGTATCTTGCGGAGTGGTTGGTGGGCATCGCTACCGACACCGAAGATACGAGCGGCACGATTGTACAACAAATGAGCGCTATCCCCAAACTTACGGCAGAACAACTCGAAACCGCCGCCGCGTTATTTCGCGGCACGATTTTACAACGGCCGTCGCAATATTCCGCGATTAAAGTGGATGGACGTAAAGCCTATGAATTGGCGCGGAAAAATCAGAAGGTGGAATTGCCTGCGCGTGAAATTACAATCCATGAATTTACGGATATTTCTTACCAATTACCGTATTTGCGCGCGCGTGTCGTTTGCTCGCAGGGAACGTATATCCGCGCGTTGGGAAGAGATTTCGGTGAGGCCCTGGGCGTACCGCTGACGATGTCATTTCTGGTGCGGGAACAGGTCGGCAATTTTACGCTGGAAGATGCGTGGACACTCGAAGAAATTCGGGCGGCGAAAGAGGCGGCGCTACGTCCTGCGACGGATGCTGTACGCCATTTGCCGCAATATCGGGTGCCGACTGCAGCGGCGGAACGCTTTCGCCACGGTCAGACGATTCGCGGCACGATCAGTGATGTGACGGCTTTGTGGTGCGATGAACAATTCATCGGTCTCGGCAAACCGGCGGAAGAAGGGGGCATACGTCCTTATAAAGTGTGGGTGGAAGAATGA
PROTEIN sequence
Length: 286
MQGIINVLKPAGMTSHDVIYVLRKIYGIRKMGHSGTLDPLAAGVLPVFLGKATRLLAWAPTEPKVYLAEWLVGIATDTEDTSGTIVQQMSAIPKLTAEQLETAAALFRGTILQRPSQYSAIKVDGRKAYELARKNQKVELPAREITIHEFTDISYQLPYLRARVVCSQGTYIRALGRDFGEALGVPLTMSFLVREQVGNFTLEDAWTLEEIRAAKEAALRPATDAVRHLPQYRVPTAAAERFRHGQTIRGTISDVTALWCDEQFIGLGKPAEEGGIRPYKVWVEE*