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71_008_scaffold_634_6

Organism: 71_008_Negativicoccus_succinicivorans_52_9

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 3344..6622

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 999.99
  • Bit_score: 2124
  • Evalue 0.0
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 999.99
  • Bit_score: 1060
  • Evalue 0.0
UPI0003D5BEB1 related cluster n=1 Tax=unknown RepID=UPI0003D5BEB1 similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 999.99
  • Bit_score: 2124
  • Evalue 0.0

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Taxonomy

Negativicoccus succinicivorans → Negativicoccus → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3279
ATGAAATCCGGATTTTGGCAAAAAATAAAAAACTCCGCGCGTTTGCAGGAACTTTTGACAGCGTTTCAGACGCGCGGCGCGCAACTGATCCACGGCGGGAGTACGGCGCAGGAAGCGGTGCTGGTGGCGGCCGCCATGCAAGGCGGTTTGCGGCACGCGGTGATCATCGTGGAAGACGCGGCGACACGACAGAAATGGGAAGATGACCTGCGCTTTTTCGCGCCCGAAATTCCCGTTTACGAATTTCCGTGGGTCGAACCCGCGCCACAGCACGTGGCGGCGCAAAGCACGGAGACGCGGGCCTTACGCACGCGCGCGCTCGCGGCGTTACAGGCCGATGAGCCGGCCGCGGTCATCGCGACGATTCGTGAAGCGAGCGCTAAAATCGCCGCGCCGTCAGATCTCGCCAAGCAAATGACGACGCTTTCCTTAGGCGACGCGCGGGATCGGGAAGCATGGTTCGCGCGTTTGGTGGCGCAAGGCTACGCGCGTGAGGAGCAGGTGGAAAGTTGCGGCGAATTCGCGGTGCGCGGCGATATCGTCGATATTTACGCGCCGAATTACGAGTATCCGCTGCGGTTGGAATTTTTCGGCGATGAAATTGACAGCATTCGCAGTTTTGATCCGGTGACGCAACGTTCCGTCAGTACCTACGAGACGGTGACGCTGGCGCCGTTCGCGCTGCCCGAAGGCGCGAGCAGTTTGCTGGCGTACTTGGCGGACGGGGCGCTGATTTGCGATGAACCGAGCCGCACGGCGGAAGCGTTGCGCGCGCTGCGCAAAGAAGACGCGGGGAAAAGCAAGCGGCATTGGTCGTGGGCGGAACTTTTACGCGACTCGCACGCGCGCAGCACGGTTTTCTTCGCGCTGATTTCGTTGCGCGTGCCGGGGGCGGAGGTTCATGCGCGCTATCCGCTGGACGGCCGACCGGCGCCCACATTTCGTAACCAATGGCCGCATTTTGTGCAGTCGGTGCAAAAATGGTCGCGGCAAGGTTACGCGACAATTATCGCGGCGGCGGATGAAACGAAACGGGCGACGTTGGAAACGACCCTGCGCGAGGCGGGTATTTTCCCGACGGACGAAGTGGCGGCGGGCATGGTTACGATTGTTGCGGAAAATGTCGATACCGGTTTTATGTGGCCGCAGGAAAAAGTGGTTGTACTCGCCACCGCGGATATTTTCGGCACGCAGAAAAAACGGCGGCGCAGACAGGTTCGTCACGGCAACGAGATCCGCTATTTCTCGGATCTGACGGAAGGCGATTACGTGGTGCACCAGGTGCACGGCATCGGTCGCTATACGGGTCTGGAAACGATTACGCTGAACGGCGCGAACCGCGATTATTTGCGGATCGAATACGCGGGCGAGGATCGGCTGTTTTTGCCGGTCGAGCGCATTCAGCAGCTGGAAAAATATATCGCGCCGGACGGAACGGTGCCGACGCTGCACAAAATGGGCGGCGCGCAATGGACGAAAACGAAGGCCCGCGCGCAAAAATCCATTGATGATTTGGCGGATAAATTGGTGGCGCTGTATGCCGAGCGTGAAGTGGAGCCGGGTTTCGCGTTCCCGCCGGACACGCCCTGGCAGCGTGAATTTGAAGACGCCTTTATGTACGAAGAAACGCCCGATCAGTTGCAGGCCGCGGCCGAGATCAAAGCGTCCATGGAAAAACCGCAGCCGATGGACCGACTGCTTTGCGGCGATGTCGGCTTCGGCAAGACGGAGGTCGCGATGCGAGCCGTTTTTAAGGCGGTTATGGCGAATAAGCAGGTCGCCGTCTTGGTACCTACGACGGTGCTTTCGCAGCAGCATTATCGTACGTTTAGCGCGCGTTTGGGCCCGTTCGGCGTCAATGTGGCGGTATTAAATCGGTTCCGCAGCGCGGCGGAGAAAAAAGAAATTTTGCGCGGCGTCAAAAGCGGCACGATTGATGTGTTGATCGGCACGCACGCCTTGTTGAATAAAGCGGTGCAATTCCGCGATTTGGGACTTTTGGTAGTCGATGAAGAGCAACGGTTCGGTGTGGCGCAGAAAGAAAAGTGGAAAGCGCGCAACACGATGGTCGATGTGCTCACGCTTTCGGCTACGCCGATCCCGCGCACGCTGCATATGTCGCTTGCCGGCGTGCGCGAGCTTTCGGTGATGTATACGGCGCCGGTGGATCGTCAGCCGGTGCAAACGTACGTGGCGGAAACCTCGGACGCGATTTTGCGCGACGCGATTTTGGCGGAAGTGCAGCGCGGCGGGCAGGTTTATTTCGTGTACAATCGGATCGCCACAATTCGCGACATGGTGCGCAAGTTGGAAACGCTTGTCGGACCGTCGGTCACGTTTGATATCGCGCATGGCGCGATGTCCGGCGAAGAGCTGGAACGGGTCATGGCGGATTTTTACGCGGGTGATTTTGATGTGCTCGTCTGCACCAGCCTGATTGAAAACGGACTGGACCAGCCGAACGCCAATACCATTGTCGTGTACGACGCGGATCGGCTCGGCCTTTCGCAGCTGTACCAGATGCGCGGGCGCGTGGGGCGTTCGGAGCGCAACGCGTTCGCGTATTTTCTGTACCGGCCGGATCAGATTATGAATGAGGCGGCGGAAAAACGCCTGTACGCGATTCGGGAATTCACCGAACTCGGCGCCGGCTTTAAAATCGCGATGCGCGATTTGGAAATTCGCGGCGCGGGGAATTTGCTCGGCAGTGAACAGCACGGCAATATGGTCGGCGTCGGCTTCACCACGTATACAACGATGCTCGATGAGGCGATCGCCGCCCGACAGGGCGAACGCGCGCCGCGTAAATCGGTGGCGGCGCCGCTCTTGGAACTGACCGCGGAAGCGTATATTCCGGACCGTTACATTGAAGATCCGACGCAAAAACTCGAAATGTACCGTCGTTTGGCGGAAGTGGATACGGCGGTCGAAGTGTCCGACCTGATCGACGAATTGGTGGACCGGTTCGGCACGCCGCCCGCGCCGGTGGAACAATTACTGCGTGTGGCGCAGTTGCGCGTGCTCGCGGCGAAAGCGGGCATCGGCAGTATTCGCGAATTGCAAAATACGGTGGAGATCACGTGGAACCGACCGGAAGCGATGGCGACTTGGGATGTGTCCAAGGTGCCCGCGAAAGTGATGAAAAGTTTGCGCTTTTTGCCAGGCGAGGTGCCGCGTGCTACAATAAATAAGTTACAGTGGAGTCATTCCGCGGTGGATTTTCTGCCGGAAATATTAGCGGCTTTTTTACAGGAAGATATTGCGCAAAGCAAGGAGTAA
PROTEIN sequence
Length: 1093
MKSGFWQKIKNSARLQELLTAFQTRGAQLIHGGSTAQEAVLVAAAMQGGLRHAVIIVEDAATRQKWEDDLRFFAPEIPVYEFPWVEPAPQHVAAQSTETRALRTRALAALQADEPAAVIATIREASAKIAAPSDLAKQMTTLSLGDARDREAWFARLVAQGYAREEQVESCGEFAVRGDIVDIYAPNYEYPLRLEFFGDEIDSIRSFDPVTQRSVSTYETVTLAPFALPEGASSLLAYLADGALICDEPSRTAEALRALRKEDAGKSKRHWSWAELLRDSHARSTVFFALISLRVPGAEVHARYPLDGRPAPTFRNQWPHFVQSVQKWSRQGYATIIAAADETKRATLETTLREAGIFPTDEVAAGMVTIVAENVDTGFMWPQEKVVVLATADIFGTQKKRRRRQVRHGNEIRYFSDLTEGDYVVHQVHGIGRYTGLETITLNGANRDYLRIEYAGEDRLFLPVERIQQLEKYIAPDGTVPTLHKMGGAQWTKTKARAQKSIDDLADKLVALYAEREVEPGFAFPPDTPWQREFEDAFMYEETPDQLQAAAEIKASMEKPQPMDRLLCGDVGFGKTEVAMRAVFKAVMANKQVAVLVPTTVLSQQHYRTFSARLGPFGVNVAVLNRFRSAAEKKEILRGVKSGTIDVLIGTHALLNKAVQFRDLGLLVVDEEQRFGVAQKEKWKARNTMVDVLTLSATPIPRTLHMSLAGVRELSVMYTAPVDRQPVQTYVAETSDAILRDAILAEVQRGGQVYFVYNRIATIRDMVRKLETLVGPSVTFDIAHGAMSGEELERVMADFYAGDFDVLVCTSLIENGLDQPNANTIVVYDADRLGLSQLYQMRGRVGRSERNAFAYFLYRPDQIMNEAAEKRLYAIREFTELGAGFKIAMRDLEIRGAGNLLGSEQHGNMVGVGFTTYTTMLDEAIAARQGERAPRKSVAAPLLELTAEAYIPDRYIEDPTQKLEMYRRLAEVDTAVEVSDLIDELVDRFGTPPAPVEQLLRVAQLRVLAAKAGIGSIRELQNTVEITWNRPEAMATWDVSKVPAKVMKSLRFLPGEVPRATINKLQWSHSAVDFLPEILAAFLQEDIAQSKE*