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71_012_scaffold_25

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Displaying items 61-90 of 137 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_25_58
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57409..57804)
DNA (396bp) protein (132aa)
Inner membrane protein YecN n=1087 Tax=Enterobacteriaceae RepID=YECN_ECOL6
hypothetical protein; K07136
Uncharacterized protein {ECO:0000313|EMBL:ESA85982.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
71_012_scaffold_25_59
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57857..58675)
DNA (819bp) protein (273aa)
UPF0759 protein YecE n=241 Tax=Enterobacteriaceae RepID=YECE_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENB13233.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
71_012_scaffold_25_60
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58672..59238)
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Shigella RepID=Q3Z2M5_SHISS
putative hydrolase
Isochorismatase family protein {ECO:0000313|EMBL:EMX19717.1}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.1.;"
71_012_scaffold_25_61
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


59548..61320
DNA (1773bp) protein (591aa)
aspS; aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
Aspartate--tRNA ligase n=271 Tax=Enterobacteriaceae RepID=SYD_ECO24
Aspartate--tRNA ligase {ECO:0000313|EMBL:ESD21080.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
71_012_scaffold_25_62
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61322..61765
DNA (444bp) protein (148aa)
dATP pyrophosphohydrolase n=60 Tax=Escherichia RepID=B7NS53_ECO7I
nudB; dihydroneopterin triphosphate pyrophosphatase
dATP pyrophosphohydrolase {ECO:0000313|EMBL:BAI55265.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
71_012_scaffold_25_63
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61794..62534
DNA (741bp) protein (247aa)
Probable transcriptional regulatory protein YebC n=1110 Tax=Enterobacteriaceae RepID=YEBC_ECO57
hypothetical protein
Probable transcriptional regulatory protein YebC {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
71_012_scaffold_25_64
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62569..63090
DNA (522bp) protein (174aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
Crossover junction endodeoxyribonuclease RuvC n=1327 Tax=Enterobacteriaceae RepID=RUVC_ECO27
71_012_scaffold_25_65
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63092..63694)
DNA (603bp) protein (201aa)
Uncharacterized protein n=10 Tax=Escherichia coli RepID=H5PKH8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:END53056.1}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
hypothetical protein
71_012_scaffold_25_66
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63969..64580
DNA (612bp) protein (204aa)
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
Holliday junction ATP-dependent DNA helicase RuvA n=98 Tax=Enterobacteriaceae RepID=C8TTA2_ECO26
71_012_scaffold_25_67
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64589..65599
DNA (1011bp) protein (337aa)
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1024 Tax=Enterobacteriaceae RepID=RUVB_ECO24
71_012_scaffold_25_68
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65746..66531)
DNA (786bp) protein (262aa)
Zinc transporter subunit: membrane component of ABC superfamily n=220 Tax=Enterobacteriaceae RepID=B7L7R2_ECO55
znuB; high-affinity zinc transporter membrane protein; K09816 zinc transport system permease protein
FecCD transport family protein {ECO:0000313|EMBL:EHW69087.1}; TaxID=868181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC10B.;"
71_012_scaffold_25_69
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66528..67283)
DNA (756bp) protein (252aa)
znuC; high-affinity zinc transporter ATPase; K09817 zinc transport system ATP-binding protein [EC:3.6.3.-]
Zinc import ATP-binding protein ZnuC {ECO:0000256|HAMAP-Rule:MF_01725}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01725};; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
Zinc import ATP-binding protein ZnuC n=1152 Tax=Bacteria RepID=ZNUC_ECO57
71_012_scaffold_25_70
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67308..68294
DNA (987bp) protein (329aa)
High-affinity zinc transporter periplasmic component n=348 Tax=Enterobacteriaceae RepID=I0VDS6_SHIFL
znuA; high-affinity zinc transporter periplasmic component; K09815 zinc transport system substrate-binding protein
YebL protein {ECO:0000313|EMBL:CEP57945.1}; TaxID=42897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 2a.;"
71_012_scaffold_25_71
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68310..69632
DNA (1323bp) protein (441aa)
Murein DD-endopeptidase MepM n=1308 Tax=Bacteria RepID=MEPM_ECOL6
hypothetical protein
LysM domain protein {ECO:0000313|EMBL:EHU23514.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
71_012_scaffold_25_72
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69752..70723
DNA (972bp) protein (324aa)
lpxM; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; K02560 lipid A biosynthesis (KDO)2-(lauroyl)-lipid iva acyltransferase [EC:2.3.1.-]
Lipid A biosynthesis myristoyltransferase {ECO:0000256|HAMAP-Rule:MF_01944}; EC=2.3.1.243 {ECO:0000256|HAMAP-Rule:MF_01944};; Kdo(2)-lauroyl-lipid IV(A) myristoyltransferase {ECO:0000256|HAMAP-Rule:MF_01944}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase n=587 Tax=Enterobacteriaceae RepID=MSBB_ECOLI
71_012_scaffold_25_73
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70854..72296)
DNA (1443bp) protein (481aa)
pykA; pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40]
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
Pyruvate kinase II n=491 Tax=Enterobacteriaceae RepID=KPYK2_ECOLI
71_012_scaffold_25_74
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72424..73293)
DNA (870bp) protein (290aa)
HTH-type transcriptional regulator HexR n=317 Tax=Enterobacteriaceae RepID=HEXR_ECOLI
RpiR family transcriptional regulator
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EII34272.1}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
71_012_scaffold_25_75
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73316..73465
DNA (150bp) protein (50aa)
Uncharacterized protein n=1088 Tax=Enterobacteriaceae RepID=B1LD19_ECOSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIG82277.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
71_012_scaffold_25_76
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73631..75106
DNA (1476bp) protein (492aa)
zwf; glucose-6-phosphate 1-dehydrogenase; K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
Glucose-6-phosphate 1-dehydrogenase n=802 Tax=Enterobacteriaceae RepID=G6PD_ECOL6
71_012_scaffold_25_77
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75341..77152
DNA (1812bp) protein (604aa)
Phosphogluconate dehydratase {ECO:0000313|EMBL:EZJ98704.1}; EC=4.2.1.12 {ECO:0000313|EMBL:EZJ98704.1};; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-182-04_S3_C1.;"
Phosphogluconate dehydratase; K01690 phosphogluconate dehydratase [EC:4.2.1.12]
Phosphogluconate dehydratase n=808 Tax=Enterobacteriaceae RepID=EDD_ECO57
71_012_scaffold_25_78
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77189..77830
DNA (642bp) protein (214aa)
eda; 2-keto-3-deoxy-phosphogluconate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
KHG/KDPG aldolase {ECO:0000313|EMBL:EFK52011.1}; EC=4.1.2.14 {ECO:0000313|EMBL:EFK52011.1};; EC=4.1.3.16 {ECO:0000313|EMBL:EFK52011.1};; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
KHG/KDPG aldolase n=1275 Tax=Enterobacteriaceae RepID=ALKH_ECO57
71_012_scaffold_25_79
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77886..79064)
DNA (1179bp) protein (393aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=1116067 species="Bacteria; Proteobacteria; Gammaproteobact
Phosphoribosylglycinamide formyltransferase 2 n=189 Tax=Escherichia coli RepID=B7L7Q2_ECO55
purT; phosphoribosylglycinamide formyltransferase 2
71_012_scaffold_25_80
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79198..79488
DNA (291bp) protein (97aa)
Uncharacterized protein YebG n=1356 Tax=Enterobacteriaceae RepID=YEBG_ECO57
yebG; hypothetical protein; K09918 hypothetical protein
DNA damage-inducible protein in SOS regulon, dependent on cyclic AMP and H-NS {ECO:0000313|EMBL:EGI11478.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
71_012_scaffold_25_81
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79555..79911
DNA (357bp) protein (119aa)
Protein YebF n=1348 Tax=Enterobacteriaceae RepID=YEBF_ECO57
hypothetical protein
Protein YebF {ECO:0000256|HAMAP-Rule:MF_01435}; Flags: Precursor;; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
71_012_scaffold_25_82
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79825..80031)
DNA (207bp) protein (69aa)
Uncharacterized protein n=105 Tax=Enterobacteriaceae RepID=J7Q7Z4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EMX40166.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
71_012_scaffold_25_83
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80068..80178)
DNA (111bp) protein (37aa)
Uncharacterized protein n=206 Tax=Escherichia RepID=J7R1Z9_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMD11449.1}; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli SEPT362.;"
71_012_scaffold_25_84
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80238..80897
DNA (660bp) protein (220aa)
Uncharacterized protein n=434 Tax=Enterobacteriaceae RepID=J7QF19_ECOLX
yebE; hypothetical protein
Inner membrane protein yebE {ECO:0000313|EMBL:ENH09145.1}; TaxID=1116070 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.7.;"
71_012_scaffold_25_85
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81106..83166
DNA (2061bp) protein (687aa)
Protease 2 {ECO:0000313|EMBL:KEN68856.1}; EC=3.4.21.83 {ECO:0000313|EMBL:KEN68856.1};; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
prtB; Protease II; K01354 oligopeptidase B [EC:3.4.21.83]
Protease II n=48 Tax=Escherichia coli RepID=H9URG2_ECOLX
71_012_scaffold_25_86
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83163..83825)
DNA (663bp) protein (221aa)
Exonuclease RNase T and DNA polymerase III; K10857 exodeoxyribonuclease X [EC:3.1.11.-]
Exodeoxyribonuclease 10 {ECO:0000313|EMBL:KDW70727.1}; EC=3.1.11.- {ECO:0000313|EMBL:KDW70727.1};; TaxID=1444053 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C1.;"
Exodeoxyribonuclease 10 n=1026 Tax=Enterobacteriaceae RepID=EXOX_ECOL6
71_012_scaffold_25_87
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83849..84505)
DNA (657bp) protein (219aa)
Uncharacterized protein n=75 Tax=Enterobacteriaceae RepID=Q3Z2J4_SHISS
hypothetical protein
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:EFK52019.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
Displaying items 61-90 of 137 in total

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