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71_012_scaffold_130_26

Organism: 71_012_Veillonella_39_38

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(29183..29857)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sporulation specific sigma-factor SigH n=3 Tax=Veillonella RepID=T0U717_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 442
  • Evalue 2.80e-121
RNA polymerase sigma-H factor {ECO:0000313|EMBL:EFG23749.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 442
  • Evalue 4.00e-121
ECF subfamily RNA polymerase sigma-24 subunit; K03091 RNA polymerase sporulation-specific sigma factor similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 224.0
  • Bit_score: 437
  • Evalue 2.90e-120

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Taxonomy

Veillonella sp. 3_1_44 → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 675
ATGAAAATGATTCATACACGCAAGTCCGATTACAATTTCAAGGAAATGACCGATGAGCAAGTTGTGGTCATAGCTCAGGAAGAGCAAAATGAGTTTGCAATCGATTATATTGTTAATAAATATAAGAACTTTGTAAGAGCTAAGGCTCGCTCCTATTTTTTGGTAGGTGCCGACCGAGAGGATATCATCCAAGAAGGGATGATTGGACTCTATAAGGCGACGCGAGATTTTAAACATGATAAATTAGCGTCTTTTAGAGCTTTTGCAGAACTTTGTATAACTAGACAAATTATTACAGCTATTAAATCGGCTACAAGACAAAAACATGCGCCTTTGAACTCCTATATATCCTTAAATAAACCGGTGTATACAGAGGACTCTGAGCGTACATTGATTGAAATGCTATCTTCAACAAAGATTACAAATCCTGAAGACCTCATTATCAGTCAAGAGGAACTAGATGATATTGAGCACAATATTGGTCATATTTTAAGTGATCTCGAATGGGAAGTCTTGGAAGGATACCTTGATGGACGTTCCTATCAAGAAATGGCTGAGGTCACAGATCGTAGTGTTAAATCTATTGATAATGCGCTACAAAGGGTAAAACGTAAATTAGAGAAGTATTTAGAACATCGTGTATTGGGCTCGCATCGAGCATCACAGGAAGGATGA
PROTEIN sequence
Length: 225
MKMIHTRKSDYNFKEMTDEQVVVIAQEEQNEFAIDYIVNKYKNFVRAKARSYFLVGADREDIIQEGMIGLYKATRDFKHDKLASFRAFAELCITRQIITAIKSATRQKHAPLNSYISLNKPVYTEDSERTLIEMLSSTKITNPEDLIISQEELDDIEHNIGHILSDLEWEVLEGYLDGRSYQEMAEVTDRSVKSIDNALQRVKRKLEKYLEHRVLGSHRASQEG*