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71_012_scaffold_870_1

Organism: 71_012_Varibaculum_cambriense_54_6

partial RP 36 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(3..644)

Top 3 Functional Annotations

Value Algorithm Source
PTS sugar transporter subunit IID n=1 Tax=Varibaculum cambriense RepID=UPI0003B40CBE similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 214.0
  • Bit_score: 407
  • Evalue 9.60e-111
Uncharacterized protein {ECO:0000313|EMBL:ETI82475.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 214.0
  • Bit_score: 399
  • Evalue 3.70e-108
Predicted membrane protein, putative toxin regulator similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 207.0
  • Bit_score: 248
  • Evalue 2.40e-63

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGAAACAACGTATTAAAGGCTGGCTATCGCTATTTTTCATCGATGCGATGACTGGCATGGCGCATGGGTTATTCGCCTCCCTGATTATCGGCACCATCATGGTGCAAGTAGGCGGTTTCATTCCGGGAATAATCGGGCGAGGGTTGGTACTGATCGGTTCGGTAGCCTCGGTACTTACCGGCGCTGGCATCGGGATAGGGGTAGCTCATCGTCTGAAGGCCTCTACCTTTGTGGTGGTAGGCACCGGTCTAGCCGGAATGATTGGCGCCCATGCTGCCAAAATCTTGAGCGGTGGAATTGTGGATGGTCTTTCCATGCAGCTGCAGGGGCCGGGAGAACCGTTGGGGGCATTTATCGCCTCCTTCGTAGCAGTTGAGTTTGGTCTGCTGGTTTCAGGTAAAACTCCGGTAGATATATTGGTTACCCCCTTCGTTACGGTTACCAGCGGCGCTATCGTAGGTCTGGCCATCGGGCCAGGTATCTCGGAGCTAATGACAGCTTTAGGAGCCATCATTAACTGGGGAACTGAGCGACAACCCTTCCTAATGGGCATTATTGTGTCGGTGCTGATGGGGATGATCTTAACGCTCCCGATTTCCTCAGCAGCTCTGGGAATCGTCTTGGGGCTATCCGGCCTGGCA
PROTEIN sequence
Length: 214
MKQRIKGWLSLFFIDAMTGMAHGLFASLIIGTIMVQVGGFIPGIIGRGLVLIGSVASVLTGAGIGIGVAHRLKASTFVVVGTGLAGMIGAHAAKILSGGIVDGLSMQLQGPGEPLGAFIASFVAVEFGLLVSGKTPVDILVTPFVTVTSGAIVGLAIGPGISELMTALGAIINWGTERQPFLMGIIVSVLMGMILTLPISSAALGIVLGLSGLA