ggKbase home page

71_012_scaffold_878_2

Organism: 71_012_Varibaculum_cambriense_54_6

partial RP 36 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 1001..1825

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B30A7E similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 274.0
  • Bit_score: 546
  • Evalue 1.70e-152
LacI family transcriptional regulator {ECO:0000313|EMBL:ETI82442.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 274.0
  • Bit_score: 485
  • Evalue 5.00e-134
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 27.6
  • Coverage: 232.0
  • Bit_score: 86
  • Evalue 1.50e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 825
TTGGCGACCCTGGCTGGAAAAACGAAAGTTGATATCGTTGTGCCCTGCGTTGACATGGGCGCCATTAACTCTGCTTTGTTGCGTGATATGACGGTACTGCTAGCCCAGGCCGGGGTTAGCGTGGTTTGCACGGTTCACCTCAAGGATCATCCTGATAATCTGGTCTCCACCATTAAAGAAACAGATGCCGCGGTTTTGCCGCTTCTACCACTAGATCAAAACACTCTTGACCTCTTAAAAGAATGTGGCGCTACAGTACTTGATTCGGTGATGCACGGGAAGGACCGACAGAATCCAGCCAGTTTAATGACCTTCCAAATGCTAAAAATCCAGGTTGACGCCTTGCAGGCACGTAATCGTCGTCATCTGGCCTTTGTGCATTGGCAAGGTAAATACCCTGACGAGGCCGCTACCGTTTACTATTTCTTCGCACAAATGGCTTGCCAGGCGGCAGGGCTATCTGCTCCCACCCAGCTGATTCTTCCCGAAGATCCCGAGAATATCCCCTCCTACTTACTAGGGGCCCTGCAAAAGAACCCCACTTTAGATGGTTTCTGCGCCATGGATGATTTAACCGCGATGGCAGTGGTACATGGATTGCGTGAATGCGGCAAAATGGTCCCCCAAGATGCCTCCGTGGTAGGTGGCTATGATTCTCCCTCCGGTCAGGTATCGCGGCCACCGATGTCCTCGGTAACAGTGGATACTCCCGCTTTGGCCTATCAAGAGTTAATACATATTGCCCAGCGCGAGGGCGACGAGCTCGACCTGGGACAAGCCCCCGGCGGCCAAATTCTGCAATATGTTGCCCGCGAGTCGGTCTAG
PROTEIN sequence
Length: 275
LATLAGKTKVDIVVPCVDMGAINSALLRDMTVLLAQAGVSVVCTVHLKDHPDNLVSTIKETDAAVLPLLPLDQNTLDLLKECGATVLDSVMHGKDRQNPASLMTFQMLKIQVDALQARNRRHLAFVHWQGKYPDEAATVYYFFAQMACQAAGLSAPTQLILPEDPENIPSYLLGALQKNPTLDGFCAMDDLTAMAVVHGLRECGKMVPQDASVVGGYDSPSGQVSRPPMSSVTVDTPALAYQELIHIAQREGDELDLGQAPGGQILQYVARESV*