ggKbase home page

71_012_scaffold_1490_2

Organism: 71_012_Varibaculum_cambriense_54_6

partial RP 36 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 898..1737

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 286.0
  • Bit_score: 465
  • Evalue 4.20e-128
putative ribonuclease H (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 238.0
  • Bit_score: 201
  • Evalue 2.50e-49
ribonuclease H n=1 Tax=Varibaculum cambriense RepID=UPI0003B58795 similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 241.0
  • Bit_score: 472
  • Evalue 3.20e-130

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGACCACCGTACCTTCCCGTGACCTGGAACTATCTCTCCTCAAAGATGCGGGGGATCGTTATGGGGCAGGCACAGCTCTGCCAGCTTCGATATCTCAAGTCCCGGCCTGGCAAATGTGCTGCGTTGGCGGTATTGACGAGGTCGGCCGCGGGGCAATCGCCGGGCCGCTAGCGGTGGGGGTAGCCGTAATTGATGGTACCGAGGGGGCGCCTCCCGCTGGTTTAACCGACTCAAAACAGTTAACTCCCCGGCGGCGCGAAGCCATGTTTGACGAGCTTTCTGTCTGGCCAGCAGCCTGGGCAGTCGGAATGGCCAGTGCCGAAGAAATCGATCAAGAAGGGCTGACCCCGGCCTTGCGGCTCGCTGCCTTCCGCGCCCTAGCAGCATTGGAGGAAAAGGGATTTTCTCCGCGATTGCTGCTCCTAGATGGCAGCTTTGACTATCTATCCGCCCCCACGGATTTATTTGCGGCCGCTAGTGTAGACCAGTCAGCATCCGCGGCGAGCACGTCCTCGCCAACAGAAATCCCCCGGGAAGTCACTACCGTAGTAAAGGGAGATGGCAAATCGGTAGTTATCGCCGCTGCCTCCGTGCTAGCAAAAGTTACTCGAGATAGACTAATGAGCGACCTATCCGATCCCGGATATGGTTGGGCAAAAAACAAGGGATATGCGTCCGCGCAGCATCTGCAGGCAATCGCGCAAATGGGACTAGATATCGATCATCGTCTCAGTTGGCATTTGCAGGGGGTATCCTCCGCATCCTTAGCGAAAGCCTGGCGTGCTCGCCGCGAAAACCGGGCGCAGCCTCCGCTAGTTTTCAGTAGTCAGAAGGGATGA
PROTEIN sequence
Length: 280
MTTVPSRDLELSLLKDAGDRYGAGTALPASISQVPAWQMCCVGGIDEVGRGAIAGPLAVGVAVIDGTEGAPPAGLTDSKQLTPRRREAMFDELSVWPAAWAVGMASAEEIDQEGLTPALRLAAFRALAALEEKGFSPRLLLLDGSFDYLSAPTDLFAAASVDQSASAASTSSPTEIPREVTTVVKGDGKSVVIAAASVLAKVTRDRLMSDLSDPGYGWAKNKGYASAQHLQAIAQMGLDIDHRLSWHLQGVSSASLAKAWRARRENRAQPPLVFSSQKG*