ggKbase home page

71_012_scaffold_700_3

Organism: 71_012_Atopobium_minutum_49_6

near complete RP 48 / 55 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 2178..2654

Top 3 Functional Annotations

Value Algorithm Source
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 320
  • Evalue 1.60e-84
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 157.0
  • Bit_score: 227
  • Evalue 3.20e-57
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Atopobium RepID=N2C0U9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 320
  • Evalue 1.20e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 477
GTGCTTCGCATTGGACACGGCTATGATGTGCATCAGCTCGTGCAGGACCGCAAGCTTATTTTGGGCGGCGTAACCATTCCGCACTCCCACGGGCTTCTCGGCCACTCAGATGCAGATGTGCTCACCCATGCATTGGCAGATGCCATTTTGGGTGCGCTGCGCGAGGGCGATCTGGGCAAGCTGTTCCCCGATACCGATCCCGCCTACAAGGATGCAAATTCGTTGGAGCTTTTGCGCAACGTGGTTCTGCTCATGCGTACACGCGGGTTTGAGCTGGTAGATTGTGACTGCACCATTGCTGCCCAAGCTCCAAAATTGGCGCCGCATCGGGAGAAAATGCGCTGTAATTTGGCGCGTGCTATGGATGTTCCGGTAGAGTGTGTGGGTATCAAGGCCACTACTACCGAGAAACTCGGTTTTGTTGGGCAGGAACAGGGCATTGCGGCGTGGGCTGTTGCCCTTTTGCAAAAACAGTAA
PROTEIN sequence
Length: 159
VLRIGHGYDVHQLVQDRKLILGGVTIPHSHGLLGHSDADVLTHALADAILGALREGDLGKLFPDTDPAYKDANSLELLRNVVLLMRTRGFELVDCDCTIAAQAPKLAPHREKMRCNLARAMDVPVECVGIKATTTEKLGFVGQEQGIAAWAVALLQKQ*