ggKbase home page

71_013_scaffold_15_7

Organism: 71_013_Bifidobacterium_scardovii_65_27

near complete RP 52 / 55 MC: 7 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(7543..8247)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTM1_BIFLS similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 216.0
  • Bit_score: 151
  • Evalue 1.00e-33
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31739.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 234.0
  • Bit_score: 451
  • Evalue 5.30e-124
two component transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 216.0
  • Bit_score: 151
  • Evalue 3.30e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium scardovii → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGAATGACGGCATGGCATCGGGGGCCGCTGTGGAACCGCAGCAGGCCGGGCCGCTGCGCGTCGCGGTGGTCGACAACGACATGCTCACCGCGAAGGTGCTGGTGCAGCTGCTGCCGAAGATGTGTCGGGGCGTGGCCGTGCCGTGGTGGACCACCTCCGGCAGCGAGGCGCTGGCGAAGACGCTCGACCCGGTCTCCCGCCCGCAGATGCTGATCGCCGACATGTCGCTCGGCGAGATCAGCGGGTTGACAATCTGCCGCCGCGTGCGCGAGACGAGCGCCGACGTGCTGCTGCTCGGCGTCACCTCGTACAGCCTGAGCCACTATGCGGAGCGCCTGGTGCAGGCCGGCGCGCAGGGGCTGGCCGACAAGGCCGGCATGCAGCAGATCGTCGCGGCGGTGGACACGATACGCCGCGGCGGCACCTTCGTTCCCGCGGAACTCGCCGGCTCCGTGTCCTTCGACACCGCCGAGCGGGCCCACGAGCGGCTCAAGGCCGGCGCCCGCAAACCGGTGAAGCTGTCCGATCAGGAGTCGCGCATCATCGACATGCTGTCACGCGGCCTGACCTACGCCGACATCGCCGAACGGCTCGCCATCACGCAGGCCACGGCACGCACCTATGCGCATCGCGCCGAGGAGAAGCTCGGCGCCGCTACGCTGGCGCAGGCCGTGGCCATGTGGGTCACCGGCGAATGGGCGTGA
PROTEIN sequence
Length: 235
MNDGMASGAAVEPQQAGPLRVAVVDNDMLTAKVLVQLLPKMCRGVAVPWWTTSGSEALAKTLDPVSRPQMLIADMSLGEISGLTICRRVRETSADVLLLGVTSYSLSHYAERLVQAGAQGLADKAGMQQIVAAVDTIRRGGTFVPAELAGSVSFDTAERAHERLKAGARKPVKLSDQESRIIDMLSRGLTYADIAERLAITQATARTYAHRAEEKLGAATLAQAVAMWVTGEWA*