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71_013_scaffold_15_30

Organism: 71_013_Bifidobacterium_scardovii_65_27

near complete RP 52 / 55 MC: 7 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(34013..35389)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5P9_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 473.0
  • Bit_score: 730
  • Evalue 8.20e-208
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 458.0
  • Bit_score: 890
  • Evalue 1.10e-255
rpoD; RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 477.0
  • Bit_score: 718
  • Evalue 1.00e-204

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Taxonomy

Bifidobacterium scardovii → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1377
ATGAGTTTGGCCAAGAAGGATGCGAAGGCAACGACGGACAATGCTGAGCAGCTCGACAAGGCGACATCCACGAAGAGGAAGGCCGCCTCGGCTGGCCGCAAGCCTTCGAGGAAAGGCGCCACGAAGAAGGCCGCGTCCGACACCGCCCGCAAGGTGACGGCGAAGGAGGATCCGATCACCGCGAACGATCCCGATGTCGGCGAGGACGTGCTGGACGACGAGGACCAGGACGGTGAGGCCGACCTCGACGATCTGGAGGACGACGAGTCCGGCCTGGACGACGAGGACGAGGACGACGAGGAGCTGGACGAGGATTCCGACATCGCCGACGACGAGGACGAGGTCAAGCGCAAGGAACCCGAGACGCCCAAGGAAAAGGGCGCGTTCGTCGTGCGCGACGACGATGACGACGACAACCTGACCCCCTCGGGCAACCCCAAGCGCCGGGTCATCGCGGCCGGCGCCACCGCCGACCCCGTCAAGGACTACCTCAAGCAGATCGGCCGCGTGAGCCTGCTGAACGCCGAGCAGGAGGTCGACCTGTCCGAGCGCATCGAGGCCGGCCTGTACGCGCAGCACCTGCTGGACACCCAGAGCGAGGGCATGGACTTCAAGCGCAAGCGCGAGCTCAAGTGGGCCGCGTCCGACGGCAAGAAGGCCAAGGACCACCTGCTCGAGGCCAACCTGCGACTCGTGGTGTCGCTCGCCAAGCGGTACACCGGCCGCGGCATGCTCTTCCTCGATCTGATCCAGGAGGGCAACCTCGGCCTGATCCGCGCCGTCGAGAAGTTCGACTGGAAGAAGGGCTTCAAGTTCTCGACCTACGCCACGTGGTGGATCCGCCAGGCCATCACCCGCGCCATGGCCGACCAGGCCCGCACCATCCGCGTGCCCGTGCACATGGTCGAGGTCATCAACAAGCTGTCCCGCGTGCAGCGCCAGATGCTGCAGGACCTGGGCCGCGAGCCCACGCCCGACGAGCTGGCGCGCGAGCTCGACATGCCGGTCGAAAAGGTGCAGGAGGTGCAGAAGTACGGTCGCGAGCCGATCTCGCTGCACACCCCGTTGGGCGAGGATGGCGATTCCGAGTTCGGCGACCTGATCGAGGACACCGACGCCATCGCGCCGTCCGACGCGGTCGCGTTCTCACTGCTGCAGGAGCAGTTCAAGCAGGTGCTGGAGACGCTGTCCCCGCGTGAGGCCGGCGTGATCCGCATGCGCTACGGCCTCGAGGACGGCCAGCCGAAGACGCTCGACGACATCGGCCGCGTGTATGGCGTGACGCGTGAGCGCATCCGCCAGATCGAGTCGAAGACCATGTCGAAGCTGCGCCACCCCTCGCGTTCGCAGACCCTGAGCGACTTCCTCGACCAGTGA
PROTEIN sequence
Length: 459
MSLAKKDAKATTDNAEQLDKATSTKRKAASAGRKPSRKGATKKAASDTARKVTAKEDPITANDPDVGEDVLDDEDQDGEADLDDLEDDESGLDDEDEDDEELDEDSDIADDEDEVKRKEPETPKEKGAFVVRDDDDDDNLTPSGNPKRRVIAAGATADPVKDYLKQIGRVSLLNAEQEVDLSERIEAGLYAQHLLDTQSEGMDFKRKRELKWAASDGKKAKDHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAITRAMADQARTIRVPVHMVEVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQKYGREPISLHTPLGEDGDSEFGDLIEDTDAIAPSDAVAFSLLQEQFKQVLETLSPREAGVIRMRYGLEDGQPKTLDDIGRVYGVTRERIRQIESKTMSKLRHPSRSQTLSDFLDQ*