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71_013_scaffold_42_1

Organism: 71_013_Bifidobacterium_scardovii_65_27

near complete RP 52 / 55 MC: 7 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(73..561)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 330
  • Evalue 1.20e-87
def1; N-formylmethionyl-tRNA deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 162.0
  • Bit_score: 313
  • Evalue 3.50e-83
Peptide deformylase 2 n=18 Tax=Bifidobacterium RepID=DEF2_BIFLO similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 162.0
  • Bit_score: 313
  • Evalue 1.10e-82

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Taxonomy

Bifidobacterium scardovii → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 489
TTGGCCATCCGTGAAATCCGGGTCGTTCCCGACCCCGTGCTGCGCACCCCCTGCGACGAGATCAAGGCCATCACTCCGGCCGTGCGCCGTCTCGTCGACGATCTGCTGGAAACCGTCGACGACCCGGGGCGCGCCGGGCTGTCCGCCAACCAGATCGGCGTGAGCCTGCGCGCGTTCTCCTACAACATCGAGGGCAGGATCGGCTATGTGCTCAATCCGGTGATCGAGGAGAAGCGCGGCGAGCAGTACGGCGACGAGGGGTGCCTGTCCGTGCCCGGCCTGTGGTACAAGACGCGCCGCGCCGACTATGCGCGCGTGCGCGGCATCGACCTGGACGGCAACGAGGTGGTGCTCGAGGGCAGTGGGCTGATGGGCCGCATGCTGCAGCACGAGTGCGACCATCTCGACGGCCACGTCTACCTCGACCGCCTCGAGAAGGAGGAGCGCCGGGCCGCGCTGAAGTACATGCGCGAGCACCAGTCCAAGTGA
PROTEIN sequence
Length: 163
LAIREIRVVPDPVLRTPCDEIKAITPAVRRLVDDLLETVDDPGRAGLSANQIGVSLRAFSYNIEGRIGYVLNPVIEEKRGEQYGDEGCLSVPGLWYKTRRADYARVRGIDLDGNEVVLEGSGLMGRMLQHECDHLDGHVYLDRLEKEERRAALKYMREHQSK*