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71_013_scaffold_51_1

Organism: 71_013_Bifidobacterium_scardovii_65_27

near complete RP 52 / 55 MC: 7 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: 2..3133

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2070
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGH7_BIFBI similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 999.99
  • Bit_score: 1938
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 999.99
  • Bit_score: 1938
  • Evalue 0.0

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Taxonomy

Bifidobacterium scardovii → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3132
TCCCAGACCGTGTTCATGGGCGACTTCCCTCTGCAGACCCCGCACGGCACCTTCATCATCGGCGGCACCGAGCGAGTCATCGTCTCCCAGCTCGTGCGCTCCCCGGGCGTCTACTTCGACCGCTCCACCGACCGCGCCTCCGGAAAGGAGGTCTTCGGCGCGAAGATCATCCCGAGCCGCGGCGCCTGGCTGGAGTTCGAGATCGACAAGCGCGACGTGCTCGGCGTGCGCGTCGACCGCAAGCGCAAGCAGTCAGCCATCGTCTTCCTCATGGCCATCGGCATGACCAAGCCGGAGATCCGCGAGGCGTTCGAGGGCTACCCGCTGGTGCTCGACGCGCTCGACAAGGAGGCCATCGAGACGCAGGACGACGCGCTGACCGATCTGTACCGCAAGATCCGCCCGTCCGACACCGCCACTCCCGAGGCCGGCCGCAACCTGCTGGATTCCTTCTACTTCAACACCAAGCGCTACGATCTGGCCCGCGTCGGCCGCTACAAGATCGACCGCAAGCTCGGCCTCGAGCACGACATCAACGACCGCAGCCTGTCGCGCGAGGACATCATCGCCACGATCAAGTACCTGGTGACGCTGCACGCCGGCGACGCGACCTTCCCCGGCACGCGCAAGGGCGAGAGCATCGACCTGCGCGTCGAGACCGACGATATCGACCACTTCGGCAACCGCCGCATCCGCCAGGTTGGCGAGCTGATCCAGAACCAGTTGCGCACGGGTCTGTCGCGCATGGAGCGCGTGGTGCGCGAGCGCATGACCACGCAGGACGCCGAGGCCATCACCCCGCAGTCGCTGATCAACATCCGCCCGGTGAACGCCACGATCAAGGAGTTCTTCGGCACCTCCCAGCTGAGCCAGTTCATGGATCAGAACAACCCGCTGGCCGGCGTGACCAACAAGCGCCGCCTGTCCGCGCTGGGCCCCGGCGGCCTGTCGCGCGACCGCGCCAGCATGGAGGTGCGCGACGTGCACCCGTCCCACTTCGGCCGCATGTGCCCGATCGAGTCCCCTGAAGGCCCGAACATCGGTCTGATCGGTTCGCTCGCGACCTTCGGCCGCGTCAACCCCTTCGGCTTCATCGAGACGCCGTACCGCAAGGTCGTCGACGGCCAGGTGACCAACGAGGTCGAGTACATGACCGCCGACCAGGAGAACGATCACGTCATCGCGCAGGTGAACCAGACGCTCGACGCCAACGGCAGGTTCGCCACCGACATGGCCCTCGCCAGGGCCAACGAGGAAGAGGCCGTCGATGTGCCGGTGAGCTCCGTCGACTACATGGACGTCTCGCCGCGCCAGATGGTCTCGATCGGTTCCTCGCTGATCCCGTTCCTCGAGCACGACGATGGCCACCGAGCGCTGATGGGCACCAACATGCAGCGTCAGGCCGTCCCGCTGGTCAAGTCCGAGCGTCCGCTCGTCGGCACCGGTTCGGAATGGCGCGTCGCCTACGATTCCGGCGACGTGATCATCGCCGACAAGCCGGGCGTCGTGATCTACGTGTCCGCCGACCTCATCCGCGTGATGAACGACGACGGCACGCAGTCGAGCTACAAGCTGACCAAGTTCCAGCGCTCCAACCAGACGACCTGCTACAACCAGCGCCCGATCATCAAGAACGGCGAGCGCGTCGAGGCCGGCACGGTGCTGGCCGACGGCCCGGCGATCGAGAAGGGCGAGATCGCCCTCGGCAAGAACCTGCTGGTCGCGTTCATGCCGTGGAACGGCTACAACTACGAGGACGCCGTGATCATCTCGCAGCGCCTGGTGCAGGACGACACCCTCAGCTCGATCCACATCGAGGAGTACGAGATCGACGCCCGCGAGACCAAGCTGGGCGCCGAGGAGATCACCCGCGACCTGCCGAACGTCGGCGAGGACGCGGTGGCCAACCTCGACGAGCGCGGCATCATCCGCATCGGCGCCGAGGTCGAGGCCGGCGACATCCTCGTCGGCAAGGTCACGCCGAAGGGCGAGACCGAGCTGACCCCGGAGGAGCGCCTGCTGCGCGCCATCTTCGGCGAGAAGTCCCGCGAGGTGCGCGACACCTCGTTGCGCGTGCCGCACGGCGAGACCGGCACCGTGATCGCGGTCAAGGAGATCACCCGCGAGGACGCCGAGGAGGACGGCGACGAGCTGCCCAACGGCGTCAACCAGATGATCCGCGTGTACATCGCGCAGCACCGCAAGATCACGCAGGGCGACAAGCTCTCCGGCCGCCACGGCAACAAGGGCGTCATCTCCCGCATCCTGCCCGAGGAGGACATGCCGTTCCTCGCGGACGGTACCCCGGTCGACATCATGCTCAACCCGCTGGGCGTGCCCTCGCGAATGAACCTCGGCCAGGTGCTGGAGCTGCACCTCGGCTGGATCGCGCATTCCGGCTGGGACATCAGCCTGGATCCCGAGCTGGAGGCCGAGTGGAAGAAGCACGTGCCGGCCGGCGCCGAGAAGGGCGAGCCGGGCACCCCGGTGGCGACCCCGGTGTTCGACGGCGTGCGCTCCGACGTGATCAGCGGCCTCATGAAGTCGACGCTGCCCAACCGCGACGGCGAGCAGATGGTCGGCGAGGACGGCAAGGCCGTGCTGTTCGACGGTCGCACCGGCGAGCCGTTCGGCAAGCCGATCTCCGTCGGCTACATGTACATCCTGAAGCTGCACCACCTGGTCGACGACAAGATCCACGCGCGCTCCACCGGCCCGTACTCGATGATCACGCAGCAGCCGCTGGGCGGCAAGGCCCAGTTCGGCGGCCAGCGCTTCGGCGAGATGGAGGTGTGGGCCCTCGAGGCCTATGGCGCCGCGTACACGCTGCACGAGATGATGACCACCAAGTCTGATGACGTCGACGGCCGCGTGCGTGTCTACGGCGCGATCGTCAGGGGCGATAACCTGCCGCCGGCGGGCATCCCCGAATCGTTCAAGGTGCTGCTCAAGGAAATGCAGTCCCTGTCGCTGAACGTCGAGGTGCTCAACGCCGATGGCGTGGCCATCGACATGAAGGACGAGGACGACGATCCGATCTCGGCGGGCGACGACCTGGGTTTCAACATCGGCGCGCGCCCCGACGCGGCGGCCAAGGAAGACCAGAAGGCCGAAACCCCGGAATATCAGTGA
PROTEIN sequence
Length: 1044
SQTVFMGDFPLQTPHGTFIIGGTERVIVSQLVRSPGVYFDRSTDRASGKEVFGAKIIPSRGAWLEFEIDKRDVLGVRVDRKRKQSAIVFLMAIGMTKPEIREAFEGYPLVLDALDKEAIETQDDALTDLYRKIRPSDTATPEAGRNLLDSFYFNTKRYDLARVGRYKIDRKLGLEHDINDRSLSREDIIATIKYLVTLHAGDATFPGTRKGESIDLRVETDDIDHFGNRRIRQVGELIQNQLRTGLSRMERVVRERMTTQDAEAITPQSLINIRPVNATIKEFFGTSQLSQFMDQNNPLAGVTNKRRLSALGPGGLSRDRASMEVRDVHPSHFGRMCPIESPEGPNIGLIGSLATFGRVNPFGFIETPYRKVVDGQVTNEVEYMTADQENDHVIAQVNQTLDANGRFATDMALARANEEEAVDVPVSSVDYMDVSPRQMVSIGSSLIPFLEHDDGHRALMGTNMQRQAVPLVKSERPLVGTGSEWRVAYDSGDVIIADKPGVVIYVSADLIRVMNDDGTQSSYKLTKFQRSNQTTCYNQRPIIKNGERVEAGTVLADGPAIEKGEIALGKNLLVAFMPWNGYNYEDAVIISQRLVQDDTLSSIHIEEYEIDARETKLGAEEITRDLPNVGEDAVANLDERGIIRIGAEVEAGDILVGKVTPKGETELTPEERLLRAIFGEKSREVRDTSLRVPHGETGTVIAVKEITREDAEEDGDELPNGVNQMIRVYIAQHRKITQGDKLSGRHGNKGVISRILPEEDMPFLADGTPVDIMLNPLGVPSRMNLGQVLELHLGWIAHSGWDISLDPELEAEWKKHVPAGAEKGEPGTPVATPVFDGVRSDVISGLMKSTLPNRDGEQMVGEDGKAVLFDGRTGEPFGKPISVGYMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLHEMMTTKSDDVDGRVRVYGAIVRGDNLPPAGIPESFKVLLKEMQSLSLNVEVLNADGVAIDMKDEDDDPISAGDDLGFNIGARPDAAAKEDQKAETPEYQ*