ggKbase home page

71_013_scaffold_668_5

Organism: 71_013_Varibaculum_cambriense_54_7

near complete RP 51 / 55 BSCG 51 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(3760..5490)

Top 3 Functional Annotations

Value Algorithm Source
isopentenyl-diphosphate delta-isomerase n=1 Tax=Varibaculum cambriense RepID=UPI0003B64810 similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 576.0
  • Bit_score: 1085
  • Evalue 0.0
Uncharacterized protein {ECO:0000313|EMBL:ETI83738.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 576.0
  • Bit_score: 1062
  • Evalue 0.0
putative ATPase of the ABC class similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 581.0
  • Bit_score: 470
  • Evalue 6.00e-130

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1731
ATGCGGGATGCAGATGAGCTAATTCGGAAAACAAAATCACTCGATGGCCGCTCCTATGGCGGATATAAACAACTAATCGGTCAATGGAGTTTTGGGGACTTTACTTTTGCTATCGACCGGGTGCAGTCCGACCCCTTTGCCCCACCTTCCGCCTGCCGAGTGCTGGTTCCGCTGGATACTGCGCAGATCCCCGCTGAGATTGCCACTGACGAGTTGGCACGGATAGCTACCGGTGATTTTTTGGCGCGGCGAGCCCGCAAAATTTTCGGGACGCGGCGCTCTAGTGGGAAATCTGAGGCGCAACTGCGAATCGCGCCGGTGGGGCAAGAAATTCTGCCGCGTTCCTCGGTAACCCTGAGTGAAGACGGGCTAGAACTGCGCGTCCAGGTACCATTCCCGGCGGCAGGCCGACGGATTTTAGGGCGTAATTTTGCCCGCTTTTTGGACTATGACCTGTGCGAATTGGTGTATAAAACCGTATGTTTCGGCGAGGACGATGGCCCGGATTTAGCCGACCTTACTCGCCATATTCACACGCTTAAAGATCATGCGGCTCTGCAAAAGCTGCTTAGCGAGCGCGGGTGGGTGGCCTTCGTAGCGGATGGGGCACTGCTGGCCAGGGCTTCCGGAATCAGCGATTTACCGATGAAAAATGCGGTACCTTTCCGTTTGCCGACGGTGTTAGGGGAGGGGACACCCTCGCCCTTGGTACAAACCGTAGAGCTACCCTATAGCGGGAAAATATCGGGAATGGCGATCCCGCAAGGAATCACCGTGATTGTAGGGGGCGGCTATCACGGGAAATCCACGCTGCTAGAAGCACTGGAGCGTGCGGTGTATCCCCACATTCCTGGGGATGGCCGGGAACTGGTAGCCACTTTGCCCGATGCGATAAAAGTGCGCGCCGAGGACGGCCGGGCGATAACTGCGACTGATATTTCCCTATTCATCGGTTCGCTGCCTGGCGGGGCTGATACCACGGAGTTCTTTACTGAAAATGCCTCCGGATCAACCTCACAAGCAGCGGCGATTACCGAAGCCATAGAGTGCGGCTCGCGGGCGCTGCTGATTGACGAAGATACCTCGGCCACCAACCTTTTATTGCGAGATAACCGGATGCGGCAACTGGTGCGCAGCGAGCCGATTATTCCCTTAATCGACCGGGTAGGAGGGATCCGGGAGGAACTGGGAGTATCCACCATTATGGTGATGGGAGGCTCGGGAGATTTCCTGGATTTAGCCGACCAGGTGCTATTACTGGAAAACTATTTGCCCTACGATGCCACCGCGAGGGCGCGGGAAGTAAGCAGGGGAGAGGCCGCAGCCAGCAGCACGGATAGCGCGGCGGCTCCCTGGCCGCAACAGGTAGTACGCAAACGCCTCCTGCTATCTTGCCCGCCTCCGCCTGCAGGACGGCGCGAAAAAACTCGCGCCGAAGGCACCGCCACATTGCGCTTGAACCGTGAAGAAATCGATATTTCCGCCCTTGCCCAAGTAGTTGATCCCGGGCAAGCAGAAGCGATTGCTTACGCGATTCGTACTATGGTCACTGACGCCACCGGTAAAGAAACTATTGCAGATGCTTGCGCCCGTTTCGCGAGCGAGTTCGCGTCCTCTAGCTGGCAGGCTTTCGCCGCCGGACGCTACCCGGCGTTCCTGGCCGCCCCCCGCCTCCAAGATATTTTCGCGGCGCTTTGCCGCTATCGCCACCTAAAAGCCCGCTCCGCCTAA
PROTEIN sequence
Length: 577
MRDADELIRKTKSLDGRSYGGYKQLIGQWSFGDFTFAIDRVQSDPFAPPSACRVLVPLDTAQIPAEIATDELARIATGDFLARRARKIFGTRRSSGKSEAQLRIAPVGQEILPRSSVTLSEDGLELRVQVPFPAAGRRILGRNFARFLDYDLCELVYKTVCFGEDDGPDLADLTRHIHTLKDHAALQKLLSERGWVAFVADGALLARASGISDLPMKNAVPFRLPTVLGEGTPSPLVQTVELPYSGKISGMAIPQGITVIVGGGYHGKSTLLEALERAVYPHIPGDGRELVATLPDAIKVRAEDGRAITATDISLFIGSLPGGADTTEFFTENASGSTSQAAAITEAIECGSRALLIDEDTSATNLLLRDNRMRQLVRSEPIIPLIDRVGGIREELGVSTIMVMGGSGDFLDLADQVLLLENYLPYDATARAREVSRGEAAASSTDSAAAPWPQQVVRKRLLLSCPPPPAGRREKTRAEGTATLRLNREEIDISALAQVVDPGQAEAIAYAIRTMVTDATGKETIADACARFASEFASSSWQAFAAGRYPAFLAAPRLQDIFAALCRYRHLKARSA*