ggKbase home page

71_013_scaffold_1583_2

Organism: 71_013_Bifidobacterium_dentium_59_6

partial RP 11 / 55 MC: 1 BSCG 12 / 51 ASCG 2 / 38
Location: comp(428..1039)

Top 3 Functional Annotations

Value Algorithm Source
SigH RNA polymerase ECF-type sigma factor n=4 Tax=Bifidobacterium dentium RepID=D2Q5A2_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 381
  • Evalue 7.00e-103
Sigma-70 region 2 {ECO:0000313|EMBL:EFM41904.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 203.0
  • Bit_score: 403
  • Evalue 1.40e-109
sigH; sigH RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 381
  • Evalue 2.20e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGACGGACAGGCGCGCGCGCTTCGAACGGCTCGCCATGCCCATCGTCGACGTGCTCTATCGGCAGGCCATGAAGCTGACCAACAATCCCGACGATGCGCAGGATCTGGTGCAGGACACCTTCGAACGCGGGTTCAAGGCCTTCGATTCCTTCAAACAGGGCACGAACTTCGCCGCGTGGATGACCACCATCGAGCGCAACGCCTACTTCAATCAGTACGCCAAGGCCAAACGCAGGCCGCAACGTGCCAACGGCTCCACCGGCGAATACGACGATTGGGATATCTACTCCGCCTCCGAACATTCGTCGGAGCAGCTGAAGTCCGCCGAACAGGAGTATCTGGACGCCTATGCGCCCGAAGAGATCATGGCCGCGTTGAACAAGCTTTCGCCGGAACGCAGGCAGGTGTTCATCGATGCGGCCATCGACGGCAAGTCATATCAGCAGGTGGCCGATGAGCAGGGCGTGAAAATCGGTACGGTGATGAGCCGTCTGAACCGTGCCCGCACGCAGCTCAAGCAGGAACTTGCGGCATATGCGAAGGAACGAGGGTATGCGGCCGGCACACGCTCCGGTGCGAAGACCGCTTCCGTCGGAAGGGGAAGATCATGA
PROTEIN sequence
Length: 204
MTDRRARFERLAMPIVDVLYRQAMKLTNNPDDAQDLVQDTFERGFKAFDSFKQGTNFAAWMTTIERNAYFNQYAKAKRRPQRANGSTGEYDDWDIYSASEHSSEQLKSAEQEYLDAYAPEEIMAALNKLSPERRQVFIDAAIDGKSYQQVADEQGVKIGTVMSRLNRARTQLKQELAAYAKERGYAAGTRSGAKTASVGRGRS*