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ALT_09252017_20_Hydrogenophilales_61_21

ALT_09252017_20_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_61_21
In projects: ALT_09252017_20  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Taxonomy override: Betaproteobacteria

Displaying items 1-50 of 359 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ALT_09252017_20_scaffold_804
Order: Hydrogenophilales (58.33%)
72 70655 bp 60.43 21.30 86.65
ALT_09252017_20_scaffold_676
Class: Betaproteobacteria (53.57%)
56 56501 bp 57.02 12.25 87.04
ALT_09252017_20_scaffold_568
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (91.3%)
46 39678 bp 61.46 23.32 94.55
ALT_09252017_20_scaffold_1408
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.72%)
43 39449 bp 57.53 22.37 91.73
ALT_09252017_20_scaffold_788
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (85.71%)
42 37097 bp 61.82 21.90 87.24
ALT_09252017_20_scaffold_556
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (58.54%)
41 39962 bp 59.34 19.81 91.89
ALT_09252017_20_scaffold_1163
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (58.82%)
34 37823 bp 60.53 19.75 87.98
ALT_09252017_20_scaffold_1485
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (84.85%)
33 20368 bp 53.41 26.20 95.31
ALT_09252017_20_scaffold_3479
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (54.84%)
31 28631 bp 63.34 22.51 89.84
ALT_09252017_20_scaffold_1391
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (70.97%)
31 29375 bp 61.89 24.00 88.29
ALT_09252017_20_scaffold_960
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.87%)
31 28068 bp 61.67 23.81 93.14
ALT_09252017_20_scaffold_729
Phylum: Proteobacteria (73.33%)
30 36095 bp 57.70 17.60 83.62
ALT_09252017_20_scaffold_2118
Class: Betaproteobacteria (63.33%)
30 26239 bp 57.13 13.39 89.42
ALT_09252017_20_scaffold_1107
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (76.67%)
30 30509 bp 61.38 17.57 96.05
ALT_09252017_20_scaffold_1943
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (89.66%)
29 29413 bp 63.19 22.89 95.36
ALT_09252017_20_scaffold_2067
Class: Betaproteobacteria (51.72%)
29 23214 bp 58.36 17.51 88.43
ALT_09252017_20_scaffold_1984
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (72.41%)
29 27763 bp 60.99 19.48 86.24
ALT_09252017_20_scaffold_1027
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (67.86%)
28 30013 bp 62.20 22.91 89.57
ALT_09252017_20_scaffold_1125
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (67.86%)
28 26774 bp 55.74 21.26 84.26
ALT_09252017_20_scaffold_1771
Order: Hydrogenophilales (57.69%)
26 21102 bp 57.01 18.92 84.16
ALT_09252017_20_scaffold_1563
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (61.54%)
26 19613 bp 56.62 24.19 94.35
ALT_09252017_20_scaffold_2240
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (76.92%)
26 19744 bp 56.54 25.28 94.96
ALT_09252017_20_scaffold_1412
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (72%)
25 21044 bp 64.66 25.23 94.27
ALT_09252017_20_scaffold_1161
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (64%)
25 24213 bp 62.60 21.24 89.59
ALT_09252017_20_scaffold_1184
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (64%)
25 23920 bp 60.61 22.61 96.45
ALT_09252017_20_scaffold_1227
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (96%)
25 23277 bp 60.46 20.59 95.93
ALT_09252017_20_scaffold_1133
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
24 24537 bp 60.97 21.78 87.27
ALT_09252017_20_scaffold_961
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (62.5%)
24 28057 bp 61.24 21.11 94.76
ALT_09252017_20_scaffold_1766
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (56.52%)
23 20640 bp 61.76 20.17 79.01
ALT_09252017_20_scaffold_1264
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (91.3%)
23 22785 bp 61.23 25.25 92.85
ALT_09252017_20_scaffold_2371
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (59.09%)
22 14317 bp 61.46 17.82 90.40
ALT_09252017_20_scaffold_1267
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (54.55%)
22 22757 bp 60.53 20.68 87.48
ALT_09252017_20_scaffold_1338
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (72.73%)
22 22515 bp 61.95 21.27 95.30
ALT_09252017_20_scaffold_1862
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (90.91%)
22 20680 bp 62.48 19.58 92.05
ALT_09252017_20_scaffold_2855
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (85.71%)
21 22483 bp 63.38 22.62 93.56
ALT_09252017_20_scaffold_1477
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80.95%)
21 20445 bp 59.26 21.23 93.62
ALT_09252017_20_scaffold_1871
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (52.38%)
21 17081 bp 60.84 21.72 89.27
ALT_09252017_20_scaffold_1640
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (85.71%)
21 18897 bp 60.90 23.33 94.44
ALT_09252017_20_scaffold_3280
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (85%)
20 17065 bp 59.85 21.39 96.69
ALT_09252017_20_scaffold_1554
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (70%)
20 25389 bp 62.31 21.03 84.18
ALT_09252017_20_scaffold_1565
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (55%)
20 19598 bp 61.98 21.40 94.30
ALT_09252017_20_scaffold_5383
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
20 21981 bp 58.58 20.51 94.91
ALT_09252017_20_scaffold_2442
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (85%)
20 18914 bp 63.08 22.64 88.85
ALT_09252017_20_scaffold_1390
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (55%)
20 21284 bp 65.29 23.87 95.54
ALT_09252017_20_scaffold_2276
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (73.68%)
19 18525 bp 61.35 22.36 92.97
ALT_09252017_20_scaffold_1917
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (84.21%)
19 18246 bp 61.25 22.15 95.05
ALT_09252017_20_scaffold_3265
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (57.89%)
19 15147 bp 61.74 21.70 94.34
ALT_09252017_20_scaffold_1948
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (52.63%)
19 16440 bp 58.12 27.23 94.85
ALT_09252017_20_scaffold_2106
Class: Betaproteobacteria (73.68%)
19 21267 bp 57.93 18.59 81.66
ALT_09252017_20_scaffold_3619
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (68.42%)
19 20798 bp 61.38 21.40 91.23
Displaying items 1-50 of 359 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.