ggKbase home page

ar11r2_scaffold_1192_1

Organism: AlumRock_MS11_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 16
Location: comp(1..633)

Top 3 Functional Annotations

Value Algorithm Source
Capsular exopolysaccharide family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNA4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 217.0
  • Bit_score: 272
  • Evalue 4.80e-70
Capsular exopolysaccharide family {ECO:0000313|EMBL:EIJ32847.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nive similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 217.0
  • Bit_score: 272
  • Evalue 6.70e-70
gumC; exopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 179.0
  • Bit_score: 107
  • Evalue 4.40e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGCTAACCGTCAATAACAATACACGTGTCGTCAGTTCCCCCCCCATCGTTAGTGCGCCTGTGCCGTATTTGGCTGTGCCTGCCAGGGGTGTGTCTACTCATACACTGACACTGGAGGATGTGTGGCGGCGTTTGTTGCGACAAAAATGGACGCTATTACTGACTGCATTGTCGATTCTGCTGTTAACTGCGTATTTTACTTGGACAGCGACACCTTCTTACCGTGCCAGTGCTACCATCCAGATTGAAAAAGAGGGGGTGCAGGTTGTTAATTTTGGCACGGTGACCAGTGCTTCCCCGGATATGGGTGAACAAGATCCTTTTTTTCGTACTCAATACGAGCAGTTGAAAAGCCGTAAGTTAGCGGAGCGGGTCATTGCTGATTTGGATTTGAGAACGCGCTTATTTGAACGCCCTGAAAAATTCAATGTGTTGACATCTATTAAAGTGATTATCAAGGGGTTTATTGGTGCGTGGCTGCCTGCTAAGCAAAAGACAGACGACGGTAAAGCCCCCGATTATGCGCAACAATTTGCAGAAAAACTGTATATAGAGCCGATTGAGAAAACACATTTGGTTAAGGTATTTTATGAAAGCTCAGACCCGGTGTTGTCGGCGGATATTGTAAATGCA
PROTEIN sequence
Length: 211
MLTVNNNTRVVSSPPIVSAPVPYLAVPARGVSTHTLTLEDVWRRLLRQKWTLLLTALSILLLTAYFTWTATPSYRASATIQIEKEGVQVVNFGTVTSASPDMGEQDPFFRTQYEQLKSRKLAERVIADLDLRTRLFERPEKFNVLTSIKVIIKGFIGAWLPAKQKTDDGKAPDYAQQFAEKLYIEPIEKTHLVKVFYESSDPVLSADIVNA