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ar11r2_scaffold_1192_10

Organism: AlumRock_MS11_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 16
Location: comp(8973..9368)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYV6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 131.0
  • Bit_score: 245
  • Evalue 3.90e-62
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=870187 species="Bacteria; Proteobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 131.0
  • Bit_score: 245
  • Evalue 5.50e-62
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 127.0
  • Bit_score: 160
  • Evalue 2.70e-37

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
GCATTGGATAAGCCAGTAGACGTTTTGCGTAAGTTGCTTGATTTTAACGAGCGTATTACGTCGTTGGATGTGACGGTTGGCAAAGACAGTGACAGCCCCTTGGTGGATTTCGTGAGCGCTGAAACCAGTGATGAACCTGACAGCAAGCTGGAAGACGAAGATATTACCCAATCTGTTGATAATTGGTTAGGTCAGCTTGAGTTTAAGCAAAAAGAAGTGATTGTGCGGCGTTTTGGTTTGCATGGTCACGAACGTGCCACGCTGGAACAGGTCGGTGAAGCGCTGGGTTTGACCCGCGAGCGCGTCCGGCAGATTCAGATGGATGCATTGAAACGTTTGCGCCGTATCCTTGAAAACAAAGGGTTATCCGGTGAAAACCTGTTAGGTATTGGTTAA
PROTEIN sequence
Length: 132
ALDKPVDVLRKLLDFNERITSLDVTVGKDSDSPLVDFVSAETSDEPDSKLEDEDITQSVDNWLGQLEFKQKEVIVRRFGLHGHERATLEQVGEALGLTRERVRQIQMDALKRLRRILENKGLSGENLLGIG*