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ar11r2_scaffold_4967_1

Organism: AlumRock_MS11_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 16
Location: 3..3665

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 999.99
  • Bit_score: 2248
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWS8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 999.99
  • Bit_score: 2248
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 999.99
  • Bit_score: 1838
  • Evalue 0.0

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3663
TTTGACGCGCGTATGGGGGCAGAAGCAGTGTTGGAACTGCTGAAAACTACTGATCTCAAAGAAGAAGTTGCGCGGATGCGTGAAGAAATCGCTGAGACAGGTTCTGAAACCAAACTGAAGCGCTTGGGTAAGCGTCTGAAATTGATGGAGTCATTCATCAATTCTGGTAATAAACCTGAGTGGATGATTATGACGGTACTGCCCGTATTGCCGCCTGATTTGCGTCCATTAGTACCGTTGGATGGTGGCCGTTTCGCCACATCCGACTTGAATGACCTCTATCGCCGTGTCATCAACCGTAACAACCGTTTGAAGCGTTTGTTAGAGCTGAATGCCCCGGATATTATCGTGCGCAATGAAAAGCGTATGTTGCAGGAGTCTGTGGATGCACTGCTGGATAACGGTCGACGTGGTCGCGCGATTACGGGTTCTAACAAGCGTCCACTGAAATCCTTGTCCGACATGATTAAGGGTAAGCAAGGGCGCTTCCGTCAGAACTTGTTGGGTAAACGTGTCGACTACTCCGGTCGTTCAGTTATCGTGGTCGGCCCTGCGCTACGTTTGCACCAGTGTGGGTTGCCCAAGAAAATGGCACTTGAACTCTTCAAACCGTTCATTTTTGGTAAGCTGCAACGCCGTGGCTTAGCGACGACCATCAAGGCGGCTAAGAAACTGGTAGAGCGAGAAACGGCTGAAGTATGGGACATCCTTGCGGAAGTCATCCGTGAACACCCGGTCATGCTCAACCGCGCACCAACTTTGCACCGTTTGGGGATTCAAGCATTTGAGCCGACCCTGATCGAAGGTAAGGCGATTCAATTGCATCCACTGGTGTGCTCAGCGTTCAACGCGGACTTCGACGGTGACCAAATGGCGGTGCACGTACCGTTATCACTGGAAGCGCAGTTGGAAGCGCGAACTCTGATGATGGCAACCAATAACGTCCTGTCACCTGCGAACGGCGAGCCAATCATTGTACCGTCACAAGACATCGTGTTGGGCTTGTATTACATGACCCGTGACGCGATCAATGCGAAAGGCGAGGGCATGATCTTCGCTGATCCGCAAGAAGTGCAGCGTGCTTACGATACAGGTAATGTGTCATTACACGCTAAAGTCAAAGTGCGTATTACGGATAGCATTAAGGATGAAGATGGTGAGTTCATCAAACGCATTCGAGTGTTGGATACCACCGTTGGTCGTGCCTTGTTGACTACGATTATGCCAGAAGGTTTGCCTTTCGAACTATTTAATACGGTTTTGAAGAAGAAGGCGATTTCTAAGCTGATCAATGAGGCGTACCGTCGTGTTGGTTTGAAAGCAGCCGTCGTGTTTGCGGATCAACTGATGTACACCGGCTACCGTTATGCGACCCGTGCGGGTGTGTCGTTCTGTGCGGATGACATGATGATCCCAGAGAAGAAAGCGGGTTTGTTGGCTGAAGCCGAAGAAGCTGTTTTGGAGATCCAAAAGCAATTCTCCAGCGGTTTAGTTACCCAAGGTGAACGCTACAACAAGGTCGTTGACATTTGGGCAAGCACCAATGAAAAAGTCGCGAAAGCGATGATGGAAAAGATTGGTAAGCAAGAAGTTATTGATGCCGAAGGCAATCTGGTTTACCAAGAATCTTTTAACTCTATCTACATGATGGCGGATTCTGGGGCGCGGGGTTCTGCTGCACAGATTCGTCAGTTAGCAGGGATGCGGGGTTTGATGGCAAAGCCAGATGGTTCAATCATCGAAACACCGATTACGTCTAATTTCCGTGAAGGCTTGAACGTTCTCCAATATTTTATCTCGACGCACGGTGCGCGGAAAGGTTTGGCGGATACCGCCCTAAAAACGGCGAACTCTGGTTACTTGACTCGCCGTTTGGTTGATGTGGCGCAAGACATGGTGGTCACGATAGACGATTGCGGTACCGTGCAAGGCATTAAAATGCGCCCAATCATCGAAGGCGGTGACGTGGTCGAAGCGTTGGCGGAGCGTGTATTGGGTCGTGTGGTGGCACAAGACGTTACTCGTGGCGATGAAGTGCTTATTCCAGCGGGTACGTTCTTGGACGAGGCATGGGTCAAGCAAATTGACGCATTGGCTGTTGACGAAATCGTGGTACGTTCTGCGATTACGTGTGAAACCCGTTACGGTGTATGTGCTAAGTGTTACGGTCGTGACCTTGCGCGTGGGCATATTGTTAATAAGGGTGAAGCTGTCGGTGTTATCGCGGCGCAATCTATCGGTGAGCCGGGTACTCAGTTGACGATGCGTACCTTCCATATCGGTGGTGCAGCAAGCCGATCTGCGGCTGAAAGCAGTATTTCGGTTAAATCCAGTGGTCAAGTTCACTTGCTTAATGTAAAAACCGTGCGCAACAAAGATGGTAAGCTAGTCGTTGTTTCTCGTTCTGGTGAGCTGGGTGTGGTCGATACAACCGGGCGTGATAAGGAACGCTATAAACTGACTTACGGTGCAATTCTTTCGGTGGAGCAATACGGTGAAGTCCAAGCAGGCCAAGAAGTGGCGACGTGGGATCCACATACACATCCGATTATTTCCGAGGTGGCAGGTCAGGTCAGCTTCAGTGATTTTATTGACAACGTAACAGTGCAAACGAAGGTGGATGAAATCACCGGCCTGTCTTCCATTGAGGTTATGGATCCTAAGAATCGCCCAGCAGCAGGTCGTGAGCTACGCCCAACAGTACGTTTGCTGGATGAGCACGGCGATAGCGTGTTCTTTGAGGGTACTAAAATTCCGGTTCAGTATCCATTGCCTGCTGGCGCTATCGTTAGCTCAACGAATGGTGCAACTGTGCAAGTCGGTGAGGTTGTGGCACGTTTGCCACAGGCATCCTCTAAAACGCGTGACATTACGGGTGGTTTGCCACGGGTTGCTGACTTGTTTGAAGCGCGTAAGCCGAAAGATGGCGCGATTCTGGCGGAAAAAACTGGGACAATTTCCTTTGGTAAGGAAACTAAGGGTAAGCAGCGTGTGATTATCACTGGTGAGGATGGCGAGCATTACGAAGAGTTGATTCCTAAGTGGCGTAATTTGGATGTGTTTGAGGGGGAGAAGCTCAATCGTGGTGAGGTGATTGCAGATGGTGAGCCGAATCCGCACGACATTCTGCGCTTGCTGGGCGCGACTGCTCTAGCAGAGTACCAAGCCAAAGAAATCCAGGATGTTTACCGCTTGCAGGGGGTGAAAATCAACGATAAACACATCGAGGTCATTGTGCGTCAGATGATGCGTAAAGTTGAGGTCATTGACCCTGGTGATAGCAAGTTCCTGCGTGGTGAGCAAACGGATTACTGGCGTGTAGTGGAAGAGAATAAGCGCCTTGATAAAGAAGGTAAGCTTAAGATCGTTTACGAGCGTTTGCTGATGGGTATTACCAAGGCATCCTTGGTAACGGATTCCTTTGTGTCTGCTGCGTCCTTCCAAGAGACTACGCGCGTTCTGACAGAGGCTGCGGTACGTGGTGCACGCGATGAACTGCGTGGTTTGAAAGAAAACGTTATTGTCGGACGTTTGATTCCGGCAGGTACTGGGTTGGCTTACCATGACGACCGTCGTAGCCAGCGTAATGAGTTTGCTTATGAGCGTCCAGCACAGACTGAAACCATCAGCTTTGGTGAGCCGTTAGACATAGATTCTGATTGA
PROTEIN sequence
Length: 1221
FDARMGAEAVLELLKTTDLKEEVARMREEIAETGSETKLKRLGKRLKLMESFINSGNKPEWMIMTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRMLQESVDALLDNGRRGRAITGSNKRPLKSLSDMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPALRLHQCGLPKKMALELFKPFIFGKLQRRGLATTIKAAKKLVERETAEVWDILAEVIREHPVMLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLEARTLMMATNNVLSPANGEPIIVPSQDIVLGLYYMTRDAINAKGEGMIFADPQEVQRAYDTGNVSLHAKVKVRITDSIKDEDGEFIKRIRVLDTTVGRALLTTIMPEGLPFELFNTVLKKKAISKLINEAYRRVGLKAAVVFADQLMYTGYRYATRAGVSFCADDMMIPEKKAGLLAEAEEAVLEIQKQFSSGLVTQGERYNKVVDIWASTNEKVAKAMMEKIGKQEVIDAEGNLVYQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITSNFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDMVVTIDDCGTVQGIKMRPIIEGGDVVEALAERVLGRVVAQDVTRGDEVLIPAGTFLDEAWVKQIDALAVDEIVVRSAITCETRYGVCAKCYGRDLARGHIVNKGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRSAAESSISVKSSGQVHLLNVKTVRNKDGKLVVVSRSGELGVVDTTGRDKERYKLTYGAILSVEQYGEVQAGQEVATWDPHTHPIISEVAGQVSFSDFIDNVTVQTKVDEITGLSSIEVMDPKNRPAAGRELRPTVRLLDEHGDSVFFEGTKIPVQYPLPAGAIVSSTNGATVQVGEVVARLPQASSKTRDITGGLPRVADLFEARKPKDGAILAEKTGTISFGKETKGKQRVIITGEDGEHYEELIPKWRNLDVFEGEKLNRGEVIADGEPNPHDILRLLGATALAEYQAKEIQDVYRLQGVKINDKHIEVIVRQMMRKVEVIDPGDSKFLRGEQTDYWRVVEENKRLDKEGKLKIVYERLLMGITKASLVTDSFVSAASFQETTRVLTEAAVRGARDELRGLKENVIVGRLIPAGTGLAYHDDRRSQRNEFAYERPAQTETISFGEPLDIDSD*