ggKbase home page

ar11r2_scaffold_45864_1

Organism: AlumRock_MS11_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 16
Location: comp(1..591)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GU79_SELRL similarity UNIREF
DB: UNIREF100
  • Identity: 28.4
  • Coverage: 197.0
  • Bit_score: 69
  • Evalue 5.70e-09
putative RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 28.4
  • Coverage: 197.0
  • Bit_score: 69
  • Evalue 1.60e-09
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium similarity UNIPROT
DB: UniProtKB
  • Identity: 28.4
  • Coverage: 197.0
  • Bit_score: 69
  • Evalue 8.10e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Selenomonas ruminantium → Selenomonas → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 591
ATGGCGGCGTCTTCTAGTGCCGATTCGGCACGCCCTACACTGACGGAACTGCTACAGGCAGTGTGGCAAGCGGCTCAAACCAAGGGCTATTGCATGCGAATGACGAAAGCTCTGGACGAGGCAAGGCCCTACTTCGTCTGGTTGGCCCGCCGGTTTGCTCCCGAGGTAGAGGTTGACGACTGCGTGCAGGAAGGGCTCGAAGGATTACTTCAGGCAGTGGGCAGATATGACCCGGACAAAGGAGTGCAATTCGCAACTTACGCGATGCCGCACGTCACCGGACGGATGCGACACTTTCTGAGAGCGCGACGAGGCTGCGCGCAAGCAGGCGAAGGCAGTTCAGGTCGCCAGGTATGGCCTGTGACCGCAACCGAGCCCTTGCCCGAGGATGAGTTTTGCTGGAAACCAGGCAATCCCAGGCCCGAATCGAGATTGTCAGAGCCTGAAGCAAATGCGTTTCTTGCCCTTGCGATGGAGCGACTTCACCCTGACGAACGTCAGGCGTTATCAGTTTTCTGGCGCGAGGGCTGCAACGAAAGCGCTTTGGCCAGAGCGTTGAAATTATCAAGACCGCACGCGCACGCTTTATTG
PROTEIN sequence
Length: 197
MAASSSADSARPTLTELLQAVWQAAQTKGYCMRMTKALDEARPYFVWLARRFAPEVEVDDCVQEGLEGLLQAVGRYDPDKGVQFATYAMPHVTGRMRHFLRARRGCAQAGEGSSGRQVWPVTATEPLPEDEFCWKPGNPRPESRLSEPEANAFLALAMERLHPDERQALSVFWREGCNESALARALKLSRPHAHALL