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ar11r2_scaffold_6596_1

Organism: ALUMROCK_MS11_Chromatiales_related_55_29

near complete RP 49 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(2..2221)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1400861 species="Bacteria; P similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 735.0
  • Bit_score: 757
  • Evalue 1.80e-215
Transcription-repair-coupling factor n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQL0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 751.0
  • Bit_score: 748
  • Evalue 8.00e-213
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 725.0
  • Bit_score: 744
  • Evalue 3.30e-212

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Taxonomy

Candidatus Contendobacter odensis → Candidatus Contendobacter → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2220
ATGAAAAACACCACCTTCTTCAGCCCCACTCTGCCAAAAAACCCGCGTGACCCGCTCTACTGGCGGCAACCTTCCGGTTCAGCCCTGAGCCTGCTCATTGCCGAAACCGCCAAGCGCCACGATGGCCTGCTCCTGCTCATCGCCCCCACCATGCAGGATGCTTACCGTTTTGAAGCCGAGTGTCGTTTTTTTATGAGCGATACTCTCCCCATTCGCGTCTTTCCCGACACCGAAACCCTGCCCTACGACCTGTTCTCGCCGCATCAAGACCTGATTGCGCAACGCCTTGCCACCCTTGACTGCTTGCCGGAACTTAAACAAGGCATCGTCATCGTTTCTGCGCCGTCCATGCTCATGCGCCTGCCGCCTGCGGATTATGTGCGCGGGCGCAGCATTCAGCTTAAAAAAGGCCAGCGTCTGGATGTCGAAGCCTTCCGCAAACGCCTGTCTGATGCGGGCTACCGCAACGTGACCCAAGTCATGGAGCATGGCGAATTTGCCGTGCGCGGCGCGATTCTCGATTTATTCCCCAGCGGCCAAAACCTGCCGGTGCGCGTGGACTTATTCGACGACGAAATCGAATCCCTGCGCCTGTTCGACCCAGAAACCCAACGCAGCCTAGAGACCATCGACGCGCTCAACCTGCTGCCCGCCCGCGACTACCCGCTGGACGACGCGGGCATTCAACACGCCCGCAAGGCTTGGGGTCACTATTTTGACCATGGCGGAAATTTGGCCGGACGCGAGCTTTTGCGCCAACTGCAACAAGGCATGCCCTTCGCCGGCATTGAATACTACCTGCCGCTATTTTTCGATGGCCTCGCCACCCTATTCGACTACCTACCCGCCCAAACCCTCTGCCTAAGTTTGCCCGGACTTGACGCAGCGGCAGATGAATTTCTGCACGAAGCCCATGAACGCTTTGATCAGCGCCGTCACGACCGTGAACGCCCTCTTTTACCGCCGGAAATGCTGTTCCTCACGCGTGAGCAGCTCGATGAAATGCTCTCTGCACGCCTGCAAGTGCGCGTGATTGCCGAAAACAACCCCGCCTTCCCACAAGCGGCGCGCTTTCCCGTTACCCCCCTGCCCGATTTAAGCTGGCAGCCCAAGGCCGACGACCCGGCGCACGCCCTGCGTCAGCTTATCGCCGAGGCTGACGGCAAAACCCTGATCGCCGCCGAATCCCCAGGCCGCCGCGAAGCCCTAGGCGACTTGCTGCGCCGCCACAATTTACGCTTTGACACGGTAGAAACGTGGGCTGAGGCTCTCGCCTCCAACAAAACCCAACTCCTCATCACTGCACCGCTCGACGAAGGCTGTCACCTCCCTTCCCCCTTTGATGGGAATGAGACATCTGTCGCCATCATCAGCGAAACCCAACTCTTCGCCGAGCGCGTCGCCCAGCGCGGCAAACGCAGCAAACGCACCCGCGATGCCGAAAGCCTGATTCACAACCTCACCGAACTCGCCATTGGCGCACCCGTGGTGCACGAAGACCACGGCGTAGGCCGCTATCAAGGCTTGAGCGTGCTTAATGTCAGCGGCTTTGATGAGGAGTTTCTCACCCTCGAATACGCCGGCGGCGACCGCATCTACGTCCCCGTCGCCAGCCTGCAACTCATCTCGCGCTACAGCGGTGCTAACCCCGACAACGCGCCGTTACACAAACTCGGCTCAGAAACTTGGGACAAAGCCAAGCGCAAAGCCATGGAGCAAACCCGCGACATTGCCGCCGAATTGCTCGATTTGAACGCCCGCCGCGCCGCACGCAAAGGCCACGCCTTCGTGCTCGACCCTGCCGCCTACGCCCAATTTGCCGCCGCCTTTCCGTTTGAAGAAACCCCCGACCAACTCGCCGCCATTCAAAGCGTCATCCACGACATGACCAGCGGACAACCGATGGATCGCGTGGTCTGCGGCGATGTCGGCTTTGGTAAAACCGAAGTCGCCATGCGTGCCGCCTTTGTCGCCGTACAAGGAGGCCGCCAAGTCGCCGTGCTCGCCCCCACCACCCTGCTTGCGCAACAACACTTGCGCAATTTCCGCGACCGTTTTGCCGATTTCGCCATCAAAATCGAAGGCATGTCACGCTTCACCAGCGGCAAAGAAAGCAAGCAGCCCCTGGATGCACTGGCCGAGGGCAAGGTGGATATTGTCATCGGCACGCACAAACTCATCTCGCCCGACATTCGCTTCAACAACCTCGGTCTAGTCATC
PROTEIN sequence
Length: 740
MKNTTFFSPTLPKNPRDPLYWRQPSGSALSLLIAETAKRHDGLLLLIAPTMQDAYRFEAECRFFMSDTLPIRVFPDTETLPYDLFSPHQDLIAQRLATLDCLPELKQGIVIVSAPSMLMRLPPADYVRGRSIQLKKGQRLDVEAFRKRLSDAGYRNVTQVMEHGEFAVRGAILDLFPSGQNLPVRVDLFDDEIESLRLFDPETQRSLETIDALNLLPARDYPLDDAGIQHARKAWGHYFDHGGNLAGRELLRQLQQGMPFAGIEYYLPLFFDGLATLFDYLPAQTLCLSLPGLDAAADEFLHEAHERFDQRRHDRERPLLPPEMLFLTREQLDEMLSARLQVRVIAENNPAFPQAARFPVTPLPDLSWQPKADDPAHALRQLIAEADGKTLIAAESPGRREALGDLLRRHNLRFDTVETWAEALASNKTQLLITAPLDEGCHLPSPFDGNETSVAIISETQLFAERVAQRGKRSKRTRDAESLIHNLTELAIGAPVVHEDHGVGRYQGLSVLNVSGFDEEFLTLEYAGGDRIYVPVASLQLISRYSGANPDNAPLHKLGSETWDKAKRKAMEQTRDIAAELLDLNARRAARKGHAFVLDPAAYAQFAAAFPFEETPDQLAAIQSVIHDMTSGQPMDRVVCGDVGFGKTEVAMRAAFVAVQGGRQVAVLAPTTLLAQQHLRNFRDRFADFAIKIEGMSRFTSGKESKQPLDALAEGKVDIVIGTHKLISPDIRFNNLGLVI