ggKbase home page

ar11r2_scaffold_1998_7

Organism: ALUMROCK_MS11_Campylobacterales_39_11

near complete RP 48 / 55 MC: 9 BSCG 44 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(5791..6237)

Top 3 Functional Annotations

Value Algorithm Source
rfaC; lipopolysaccharide heptosyltransferase-1 (EC:2.4.1.-) similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 139.0
  • Bit_score: 130
  • Evalue 3.40e-28
Lipopolysaccharide heptosyltransferase-1 n=1 Tax=Helicobacter acinonychis (strain Sheeba) RepID=Q17YB7_HELAH similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 139.0
  • Bit_score: 130
  • Evalue 1.20e-27
Lipopolysaccharide heptosyltransferase-1 {ECO:0000313|EMBL:AFI05484.1}; TaxID=1163745 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 137.0
  • Bit_score: 130
  • Evalue 1.70e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Helicobacter cetorum → Helicobacter → Campylobacterales → Epsilonproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
GTGCGCAATATTCGGCTAGAAGTGTCCTTAAAGGAAATTATATTGAAAATAGCGATTATTAGACTCTCCGCCATCGGCGATATAGTGTTTAGCCTTATAGCAGCAGCTATGATTAAGCAAAACTACAAAAATGCACATATTACCTGGATTGTGGACGAGAGATTTACAGAGATTGTGCAAGACTCGCCTTTTGTTGATAAGATAGAAAGCCTAAGATTAAAACCATTTAATATAAAACTCCTAAAATATGAAGTGGCAAAGATAAAAGCACTTGAAGAATTTGATGTTGTTCTTGATTTACAAGGACTTATAAAATCAGCTATTGTAACGAATTTTGTAAACGCCAAAAAAAAAGTTGGATTTTCATATAAAAGTGCTAGGGAGGGTGCAGCAAGTGTGTTTTATACCAAAAAAGCGATTAGTGACTACCAAAAAAATATCATATAA
PROTEIN sequence
Length: 149
VRNIRLEVSLKEIILKIAIIRLSAIGDIVFSLIAAAMIKQNYKNAHITWIVDERFTEIVQDSPFVDKIESLRLKPFNIKLLKYEVAKIKALEEFDVVLDLQGLIKSAIVTNFVNAKKKVGFSYKSAREGAASVFYTKKAISDYQKNII*