ggKbase home page

ar11r2_scaffold_5160_5

Organism: ALUMROCK_MS11_Chromatiales_related_55_29_curated

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 10 / 38 MC: 3
Location: comp(3015..3578)

Top 3 Functional Annotations

Value Algorithm Source
methyltransferase (EC:2.1.1.52) similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 183.0
  • Bit_score: 171
  • Evalue 1.30e-40
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; Flags: Precursor;; TaxID=1144341 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. YR343.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 184.0
  • Bit_score: 171
  • Evalue 6.40e-40
hypothetical protein n=1 Tax=Halomonas zhanjiangensis RepID=UPI000360725A similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 182.0
  • Bit_score: 175
  • Evalue 3.20e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pantoea sp. YR343 → Pantoea → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGATCCGCATCATCGGCGGCGAACATCGAAGTCGCCAACTCAAAGTCCTCGACCGCCCCGGTTTACGCCCCACGCCTGACCGTGTGCGAGAAACGCTGTTCAACTGGCTGGCGGCGGATATTTCCGGCGCGCGTGTTCTGGATGGTTTTGCTGGCAGCGGCGCACTAGGCTTTGAGGCGCTCTCACGCAGTGCCGCTTGGTGCGATTTTGTTGAAAAAGACACAGCGGCTGCGAACTTGATTCAACAGAACATCGAGCTTTTGCGCCTCAATCAACGTGCCAAGGTGGTGCGCCAAGATGCGCTAGTGTTTCTCAAACAGGCTCCCTCGCAGCCTTATGATGTGGTTTTTCTCGATCCACCCTATGCCAGCGAGCTGCTTGCTCAAGCTCTACTCCCCTTGCATCAACCCGGTTGGCTTGCGCGTAACGCCAAGATTTTTATCGAGCATTCGGCGCACCAAAATCCACCCGCCCTACTCAATAACGGCGAGCATTGTTGGGAAAAACTGCGCCAAGGCACGGCAGGTGAGGTAAGTTATAGCCTCTATCAAGCCGTGAGTTAA
PROTEIN sequence
Length: 188
MIRIIGGEHRSRQLKVLDRPGLRPTPDRVRETLFNWLAADISGARVLDGFAGSGALGFEALSRSAAWCDFVEKDTAAANLIQQNIELLRLNQRAKVVRQDALVFLKQAPSQPYDVVFLDPPYASELLAQALLPLHQPGWLARNAKIFIEHSAHQNPPALLNNGEHCWEKLRQGTAGEVSYSLYQAVS*