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ar11r2_scaffold_36781_4

Organism: ALUMROCK_MS11_Chromatiales_related_55_29_curated

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 10 / 38 MC: 3
Location: 969..1175

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 72.0
  • Bit_score: 77
  • Evalue 6.10e-12
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Thiocapsa marina 5811 RepID=F9UFV7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 72.0
  • Bit_score: 77
  • Evalue 4.30e-12
rumA; 23S rRNA 5-methyluridine methyltransferase similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 72.0
  • Bit_score: 75
  • Evalue 3.60e-12

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Taxonomy

Thiocapsa marina → Thiocapsa → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGAGTAATAAACGCAAAGGTTTGATTTTTGAAGTCGATATCACAGGTTTCACCCACGAGGCGCGCGGTGTGGCGCACCACGAGGAGAAGGCGGTGTTTGTCGATGGCGCGTTGCCCTGCGAGCGAGTCAAAGTGCGCCTGACTAAGCCGCATCGTCGTTTTGATGAGGCTGAGGTGATTGAGGTGATTACGCCATCACCGGATCGG
PROTEIN sequence
Length: 69
MSNKRKGLIFEVDITGFTHEARGVAHHEEKAVFVDGALPCERVKVRLTKPHRRFDEAEVIEVITPSPDR