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ar4r2_scaffold_1372_10

Organism: ALUMROCK_MS4_Thiotrichales-related_46_269

near complete RP 41 / 55 MC: 1 BSCG 43 / 51 MC: 4 ASCG 11 / 38 MC: 1
Location: 9907..13359

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=187272 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 999.99
  • Bit_score: 1177
  • Evalue 0.0
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000370D935 similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 999.99
  • Bit_score: 1193
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 999.99
  • Bit_score: 1177
  • Evalue 0.0

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Taxonomy

Alkalilimnicola ehrlichii → Alkalilimnicola → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3453
GTGATTTTCAAGTTGCCTTTATGGAATCAACAACAACATAAAACGCTGTATTGGTCTGGTCTTAACGAGGGTGGCATAGCGCTTGCCTTGTCACAGTTAGGAGAGTCACTCAACAAGCCTTTGCTCGTTATCACCGATAGCGCTCAACAAGCGCAACAACTCGCTAACGAGCTGAATTTTTACGCTAGCGACAACAACAGCAGTCAAAGCGCCCTCCTCTTTCCTGATTGGGAAACGCTACCTTATGACCGATTTTCGCCACATCAGGACATTATTTCCGCACGTTTGCAAGCACTCTACCGCCAAGCAACCACCCCCCCGCGTTTCCTGATTGCGCACATTGCCACGCTCATGCATCAGCTTATTCCAGCGGACTACCTACTCAGCCGCAGTTTTGTGCTATCAACAGGACAGCAAATTAATCGCCATGAGTTTACGCGCAACCTGGAAACTAACGGTTATCAGCGCGTCAGTCAGGTGATGGAACATGGTGAATATGCACTCAGAGGCGCATTGCTCGATGTCTTTCCAATGGGGGGCGAGCAGCCATTACGCATTGACTGGCTCGACGATGAGATTGATTCCATTCGTCAATTCGATGTCAGTAGCCAACTGACCACGCAAAAAATAGACGCGATTACCCTACTGCCTGCTAAAGAATATCCGCTAGATAATGACAGCATTCATTTGTTTCGCCAACAATGGCGCGATGCTTTCCCTGATAATAATACCCGCACCAACTGGCTCTACCAAGCCGTTTCTAAAGGACAAAGTGCTAGCGGATTAGAATATTATCTGCCCTTATTCTTTGAGCAGCTCAGCGCCATCACCGACTATCTCACCAACGACACGCATCTGGTGTGGGTCGGTCAAGTCGTAAGCGCAGCAGAAGCTTTTTATCGGGATGTTGAAGAACGCTACACCATTGGTAAACTAGACCCCAATCATCCGCTATTGCCACCCGAACGCGTATTTCTAGCCGCCAATGAACTTTTGGCTCGCATGAAGCCTTTTTATCGCATTGAATTATCCAGTGAAGCCAAAGCCGACAATAGCCAACACTGGGCGATGAAACCCCTGCCCGACCTAAGCATTGACCCCAGCAGACCCGACGCACTCTGGCGGCTCGCTGACTGGTTGCCGAGCCTAGCCAGCAACACTAAAGTGCTGTTAGTGGCGGAGTCAGTCGGGCGACGCGAAGTATTAATTGAGTTGTTACAAAAATCCAAGCTCAAGGCACAGCGTGCCGAAAACTGGTCGGATTTTTTAACATCGCCAGAATCGGGTTTATATTTAACCGTCGCTCCGCTCACGCACAATCTATGGCACGACGACTTAGTGGTCATCAGCGAGGTCTCGCTTTATGCCAGCCAAGTAAGACAAACCCGTCGCCGCAAACGCAGTGCGCATCAAGACTTTACCGACGGTATTCGTTCGTTGGCTGAATTGGATATTGGCTCTGCCGTAGTGCATCTCGAACATGGTGTGGGTCGATACATGGGGTTAGAAACCCTCACCTTGGGTGATATTCCGCGTGAATTTGTCGCTCTAGAATACGCGGGTGGCGATAAGCTTTATGTCCCCATCACCAATTTACATTTGATTAGTCGTTATGCAGGCGCCGATGCCGATCATGCTCCTTGGCACAAGCTAGGCAACGACCGTTGGAACAAAGCACGTAAACAAGCCATTGAAAAGGTACGTGATGTCGCTGCAGAACTGCTCGACTTGTACGCTGCGCGCGAAGCGCGTCGCGGTCATGCTTTTGCTGATGCAGGTGCTGATTACCTGCGCTTTAGCGCAGGGTTCGCTTTCGAGACAACGCCTGACCAACAAAACGCCATTGATGCCGTGATTGCCGATATGCAATCTCCTCGTCCCATGGATCGTTTAGTCTGTGGCGATGTGGGTTTTGGTAAAACCGAAGTGGCGATGCGCGCCGCTTTTATGGCAGTGCACGGTGGTAAACAGGTGGTGGTATTAGTGCCAACCACCCTGTTAGCGAATCAACATTTACAAAACTTCCGCGATCGCTTTGCTGACTGGCCTGTCAAAATCGAGGCGCTTTCTCGTTTTGGCGGTTCGGGCAATCAAGCCAAAGTGATTGAACAGGTTGCCGAAGGTAAAGTAGATATCGTTATCGGTACGCATAAGCTGTTGCAAAGTGATATGAAATACCATGATTTAGGTCTCATTATCATCGATGAAGAACACCGTTTTGGCGTTAAGCAAAAAGAATTCCTAAAAAGCCTGCGCACCCAAGTCGATATTCTTGCCATGACGGCCACCCCCATTCCGCGCACGCTTTCCATGGCCTTCGCTCAGTTGCGTGACATGTCGATTATTGCCACACCACCAGCTAAACGTCAATCGATTCAAACCTTTGTGCAAGACTGGAATGCGGAACTGGCCAAAGAAGCTTGCACCCGTGAGTTGCGTCGTGGCGGACAGGTGTATGTGTTGTTTAATGACGTCGAGCGTATGCCAACCTTTGTCGATGAACTCAGCCAATTAATGCCCGATGCACGTATTGCCATGGCCCATGGTCAAATGCCTGAACGTGAATTAGAGCGTGTCATGCGTGATTTCTACCATCAAAATTACAATATTTTGGTTTCCACCACCATTATTGAAACGGGTATTGATATTCCCAATGCCAATACCATCCTCATTCATCGTGCCGACAAGTTTGGCTTGGCACAACTGCACCAACTACGCGGTCGCGTTGGCCGTTCACACCACAAAGCCTATGCCTACCTATTTACACCCCCTAAAGAAGCACTCAGCGCCGACGCAGTTAAGCGACTAGAAGCGATTGCACGCCACGACCAATTGGGTTCTGGTTTTGCCTTAGCCAGTCAAGATTTGGAAATTCGCGGTGCTGGCGAGCTGCTTGGACATGAACAAAGCGGTCAACTGCAAGAAATTGGTTTTGAACTTTACACGCAACTGCTAGATAAGGCAGTACGCGCTTATCGACGCGGTGAAGTGCCTAATTTAGAAGATAACAGTGAACAGTGTGATGTTGACTTAGCCATACCTGCACTCATTCCCGACGACTATCTACCCGACATTTCAGCGCGTTTGGTACTTTATAAGCGCATTAACGCCGCCGAAGATCAAGCGGCCCTACATCAGCTTCAAGTCGAAATGGTCAACCGCTTTGGCTTACTGCCCGATGCCTGCAAAAACCTGTTTGCCATTATGCAACTCAAACAACAAGCGTTGTCTTTGGGCATTCATAAAATCGAAGCCACTAGCAACCAGATTAAATTGCACTTTTTGGCTAAAACCCAAGTTGAACCGCTCAAACTCATTCAACTGATACAACAACACCCTAAAATTTATAAACTCGACGGACCAAACAAGTTAAAATGGCAAGGTAATATCAGCGAGGCATCAGACAGGCTTGCTGCCGTTGAACACTTACTCAACCAACTTACCCCATCTTGA
PROTEIN sequence
Length: 1151
VIFKLPLWNQQQHKTLYWSGLNEGGIALALSQLGESLNKPLLVITDSAQQAQQLANELNFYASDNNSSQSALLFPDWETLPYDRFSPHQDIISARLQALYRQATTPPRFLIAHIATLMHQLIPADYLLSRSFVLSTGQQINRHEFTRNLETNGYQRVSQVMEHGEYALRGALLDVFPMGGEQPLRIDWLDDEIDSIRQFDVSSQLTTQKIDAITLLPAKEYPLDNDSIHLFRQQWRDAFPDNNTRTNWLYQAVSKGQSASGLEYYLPLFFEQLSAITDYLTNDTHLVWVGQVVSAAEAFYRDVEERYTIGKLDPNHPLLPPERVFLAANELLARMKPFYRIELSSEAKADNSQHWAMKPLPDLSIDPSRPDALWRLADWLPSLASNTKVLLVAESVGRREVLIELLQKSKLKAQRAENWSDFLTSPESGLYLTVAPLTHNLWHDDLVVISEVSLYASQVRQTRRRKRSAHQDFTDGIRSLAELDIGSAVVHLEHGVGRYMGLETLTLGDIPREFVALEYAGGDKLYVPITNLHLISRYAGADADHAPWHKLGNDRWNKARKQAIEKVRDVAAELLDLYAAREARRGHAFADAGADYLRFSAGFAFETTPDQQNAIDAVIADMQSPRPMDRLVCGDVGFGKTEVAMRAAFMAVHGGKQVVVLVPTTLLANQHLQNFRDRFADWPVKIEALSRFGGSGNQAKVIEQVAEGKVDIVIGTHKLLQSDMKYHDLGLIIIDEEHRFGVKQKEFLKSLRTQVDILAMTATPIPRTLSMAFAQLRDMSIIATPPAKRQSIQTFVQDWNAELAKEACTRELRRGGQVYVLFNDVERMPTFVDELSQLMPDARIAMAHGQMPERELERVMRDFYHQNYNILVSTTIIETGIDIPNANTILIHRADKFGLAQLHQLRGRVGRSHHKAYAYLFTPPKEALSADAVKRLEAIARHDQLGSGFALASQDLEIRGAGELLGHEQSGQLQEIGFELYTQLLDKAVRAYRRGEVPNLEDNSEQCDVDLAIPALIPDDYLPDISARLVLYKRINAAEDQAALHQLQVEMVNRFGLLPDACKNLFAIMQLKQQALSLGIHKIEATSNQIKLHFLAKTQVEPLKLIQLIQQHPKIYKLDGPNKLKWQGNISEASDRLAAVEHLLNQLTPS*