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ar4r2_scaffold_11333_1

Organism: ALUMROCK_MS4_Thiotrichales-related_46_269

near complete RP 41 / 55 MC: 1 BSCG 43 / 51 MC: 4 ASCG 11 / 38 MC: 1
Location: 1..915

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0 similarity UNIPROT
DB: UniProtKB
  • Identity: 38.1
  • Coverage: 307.0
  • Bit_score: 184
  • Evalue 2.70e-43
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Idiomarina sp. A28L RepID=F7RVL7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 34.6
  • Coverage: 338.0
  • Bit_score: 180
  • Evalue 2.10e-42
23S rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 307.0
  • Bit_score: 184
  • Evalue 5.30e-44

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Taxonomy

Pseudomonas cremoricolorata → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
GAGCCTTGGCACTATCGTCGTCGAGCGCGCTGGGCATTGAATCGCCAACACGAATTGTGTTTTCGGTCGGCGGGGGGTAAATATCTGGTGCCGATTCAGGCCTGCCCACAATTATCGCTACCACTCGCTGAATCTCTTGCGCAATTACGTGAAGCCTTGCCTAAGTTACCCTGTCAGGGCGTGGATGAAATCGAATGCTTGGCGATGGGTGAGCAGTCATTGGTGTTACATACCAATCAACATTGGCGTGAACATCAACTGAATGCTTGGCAGGCTTGGTGTGAGCGCGTGGGCATGGCGGGTCTGGCCATTCAAAGCCCAGAACGTGGTGCTTCACTAACTTCGGTTAAGACGGCTAACTTGCATTACGCCTTGGGTGAGTTAACCTTTCATTTTTCGCCTGACCAATTCGTGCAAACCCATGCTCGCGTCAATGAGCAAATGGTGTCTTTAGCGAAAGACTGGTTAGCGGCCAGTGCGGACGACCCAGTATTGGAGTTGTTCTGTGGTATGGGAAATTTCTCATTACCGATTGCGCAAGGCGCAGGCAGTTTACTCGGCTTAGAGTTAAACGAGCAAAGTGTGGCAACCGCCAAAGCCAATGCCATGACCAACGGTATTGTGAATACCGCCTTTGCTCAGGTAGATTTGTTTGCGCCAGATTGGCGTCCGCCAGCGGGTTTAGCCCATGTGTTGCTAGATCCGCCTTGGGATGGTGCGCAAGTGGCTTGTGAACGTATTGCCAAACAAAAGTCGGTGAAGCGTGTGGTGTATGTTTCTTGCCATCCTGCAACCATGGTACGAGATATGGCGGTACTACAGAAAGCAGGTTTCAAGCTGAATAAAATGGCGCTGATCGATCAGTTCCCGCAAAGTTATCATGTTGAGGCGATTGCCTTACTCGTCAGAAGTTGA
PROTEIN sequence
Length: 305
EPWHYRRRARWALNRQHELCFRSAGGKYLVPIQACPQLSLPLAESLAQLREALPKLPCQGVDEIECLAMGEQSLVLHTNQHWREHQLNAWQAWCERVGMAGLAIQSPERGASLTSVKTANLHYALGELTFHFSPDQFVQTHARVNEQMVSLAKDWLAASADDPVLELFCGMGNFSLPIAQGAGSLLGLELNEQSVATAKANAMTNGIVNTAFAQVDLFAPDWRPPAGLAHVLLDPPWDGAQVACERIAKQKSVKRVVYVSCHPATMVRDMAVLQKAGFKLNKMALIDQFPQSYHVEAIALLVRS*