ggKbase home page

ar4r2_scaffold_14052_1

Organism: ALUMROCK_MS4_Thiotrichales-related_46_269

near complete RP 41 / 55 MC: 1 BSCG 43 / 51 MC: 4 ASCG 11 / 38 MC: 1
Location: 2..496

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase Rsu; K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] Tax=CG_Mariprof_05 similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 160.0
  • Bit_score: 227
  • Evalue 1.50e-56
ribosomal large subunit pseudouridine synthase E n=1 Tax=Spongiibacter tropicus RepID=UPI0003B64CE3 similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 162.0
  • Bit_score: 227
  • Evalue 1.40e-56
pseudouridine synthase, Rsu similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 159.0
  • Bit_score: 222
  • Evalue 1.20e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Mariprof_05 → Zetaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
GAAGAGGATAAATCAACGCTGAAAGATTTTATCGACATCCCTCGTGTCTATCCTGCCGGTCGGCTGGATTATGACAGCGAGGGATTGTTGTTATTAACCGATGATGGTCGGTTGCAAGCACGCATTAGCGATCCTCAGCATAAACTGCCCAAAATCTATTGGGTGCAGGTGGAGGGTGAAATCACGTCCGAAGCTATTCAAGCTTTGCAACAGGGCGTGGTGTTAAAAGATGGGCTAACGAAACCCGCTCAGGCTGTGGCAATGGATGAGCCAAAGGGGTTGTGGGAAAGAGTGCCGCCTGTGCGCTATCGTGCCAGTATTCCTACCAGTTGGTTGAGCTTAACCATCCGCGAGGGGCGTAATCGGCAGGTAAGGCGAATGACTGCCGCAGTGGGGTTTCCTACTTTGCGCTTAATTCGTTATGCCATTGGTGATGTAACCCTAGCGGAATTGCCTGTGGGTAGGTTTAAGGAGATAAGATTAACAGCCCTTTAA
PROTEIN sequence
Length: 165
EEDKSTLKDFIDIPRVYPAGRLDYDSEGLLLLTDDGRLQARISDPQHKLPKIYWVQVEGEITSEAIQALQQGVVLKDGLTKPAQAVAMDEPKGLWERVPPVRYRASIPTSWLSLTIREGRNRQVRRMTAAVGFPTLRLIRYAIGDVTLAELPVGRFKEIRLTAL*