ggKbase home page

ar4r2_scaffold_30068_2

Organism: ALUMROCK_MS4_Thiotrichales-related_46_269

near complete RP 41 / 55 MC: 1 BSCG 43 / 51 MC: 4 ASCG 11 / 38 MC: 1
Location: 769..1248

Top 3 Functional Annotations

Value Algorithm Source
Peptidoglycan-binding lysin domain-containing protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYU0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 127.0
  • Bit_score: 215
  • Evalue 4.00e-53
Peptidoglycan-binding lysin domain-containing protein {ECO:0000313|EMBL:EIJ36533.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 127.0
  • Bit_score: 215
  • Evalue 5.60e-53
LysM domain/BON superfamily protein similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 127.0
  • Bit_score: 176
  • Evalue 5.80e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGCGATGTTTATTTGAAATAAACCAGCTATACTTGTTCGTGGAGATTGATCCACCTAATAATCCGAAGGAGACAACAAGATGGGACTTTTTGATAGCACCCGCCGCACTGGAACAGCACATTAACGAAGACAATCCGGGCGTAAGCGGTTTGCAAGTGCAGGTACAAGATGGCGTTGCAACTTTAACAGGCGAAGCAAGCTCGGCTGAGGCACTGGAAAAGGCGGTTTTGATGGCTGGCAATGCGATGGGCATCCAGGAAGTAAAAGCTGACGGCATGACTATTGCTGATGGCAGCCAAGTCGGTGGTGACGATGAGTTTTACATTATCGAAAAAGGCGACACCCTGTGGGAAATCGCAGAAAAAGCCTACGGTAACGGTTCAAAATACACCAAGATTGTTGAAGTGAATCGCGAAGTCATCAAAAACGCCGATTTGATCTTCCCCGGTCAAAAAATTCGTATTCCTAAAGACATTTAA
PROTEIN sequence
Length: 160
MRCLFEINQLYLFVEIDPPNNPKETTRWDFLIAPAALEQHINEDNPGVSGLQVQVQDGVATLTGEASSAEALEKAVLMAGNAMGIQEVKADGMTIADGSQVGGDDEFYIIEKGDTLWEIAEKAYGNGSKYTKIVEVNREVIKNADLIFPGQKIRIPKDI*