ggKbase home page

ar4r2_scaffold_67636_1

Organism: ALUMROCK_MS4_Thiotrichales-related_46_269

near complete RP 41 / 55 MC: 1 BSCG 43 / 51 MC: 4 ASCG 11 / 38 MC: 1
Location: comp(10..690)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamD n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FV7_THICR similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 168.0
  • Bit_score: 189
  • Evalue 3.30e-45
competence lipoprotein ComL similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 168.0
  • Bit_score: 189
  • Evalue 9.40e-46
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiacea similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 168.0
  • Bit_score: 189
  • Evalue 4.70e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiomicrospira crunogena → Thiomicrospira → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGACTAACTTTTCTCATTTTTCGTCCGTTAAAGGGGCGATGACCAAAATCGCAGCCGTGTTACTCGCGATGCAATTACTCAATGGCTGTTCTTTATTCACCAAAGAAGTAGAGCCTATTCGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCTCGCTTGAATTGGCTTACGCTTACTTCCGTAATAACGAGCCACAATCAGCGGTACGTGAACTGGAAGAGTTTATTCGTATGTACCCACGACACCAACGACTGGCTTATGCGATGTATTTAAAAGGCATGGCGCGCGAAAGCACCACGCGCAGCTTTTTGGACAACTACATTTCTGACCCTGCTCGTCGTGACAGTGAACCCATTCGTCAGGCCTACCAAGATTACTTAACCTTAATTCAGCGCTTTCCTAATAGCGAATATGCCGACGATGCCAAATTCCGTCTGGTCAAACTGCGTAATAATTTAGCACGTCACGAACTACAAGTCGCTGAGTTCTATGTGGAACGCGCTGCTTGGTTAGCCGCTGCTAAACGTGCGCAATACGTGTTAGAAAACTACCCACAAACGGTCAGTAGTCAACGTGCCTTGCAAATTATGGCCAAAGCTTACGATGAGTTAAAACTCACCGCAGCAGCTGACGAAGTGAAGCAAGTGATGCAACTCAACAAAATCCCCACGCAATAA
PROTEIN sequence
Length: 227
MTNFSHFSSVKGAMTKIAAVLLAMQLLNGCSLFTKEVEPIRXXXXXXXXXXASLELAYAYFRNNEPQSAVRELEEFIRMYPRHQRLAYAMYLKGMARESTTRSFLDNYISDPARRDSEPIRQAYQDYLTLIQRFPNSEYADDAKFRLVKLRNNLARHELQVAEFYVERAAWLAAAKRAQYVLENYPQTVSSQRALQIMAKAYDELKLTAAADEVKQVMQLNKIPTQ*