ggKbase home page

ar4r2_scaffold_28574_2

Organism: ALUMROCK_MS4_Thiotrichales-related_46_269

near complete RP 41 / 55 MC: 1 BSCG 43 / 51 MC: 4 ASCG 11 / 38 MC: 1
Location: 795..1133

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E (GspE) n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRA6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 102.0
  • Bit_score: 150
  • Evalue 8.60e-34
Type II secretion system protein E (GspE) {ECO:0000313|EMBL:EIJ33899.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thioth similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 102.0
  • Bit_score: 150
  • Evalue 1.20e-33
general secretory pathway component, cryptic similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 111.0
  • Bit_score: 82
  • Evalue 6.20e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGAGTGATACCCAATCCTCCGCGCTGCTAAAAGATTTACCGTATAGCTTCGCCAAGCGGCACGGCGTATTGCTACAAAGCACCTCAGACGGAGCAATGGTGCAATGCCGTCAAGGGGTTAGCGCGTTGGCATTGGCGGAAGTGCAGCGATTGATGACGGGTGAACTGCACTTTCAGACGGTGGATTCGGAAAGTTTTGATCGTTTATTAGCGGCACACTACGAGCGTAGTCAAGTTGGCTCTTTGATGATTCAGGAGATTGATGAGGATGTCGATCTTCAGGATATTGCCGGTTCCTTGCCAGAGCCAGAGGATTTGCTGGAGTCGGCAGATGATGCT
PROTEIN sequence
Length: 113
MSDTQSSALLKDLPYSFAKRHGVLLQSTSDGAMVQCRQGVSALALAEVQRLMTGELHFQTVDSESFDRLLAAHYERSQVGSLMIQEIDEDVDLQDIAGSLPEPEDLLESADDA