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ar4r2_scaffold_3121_6

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(5562..7061)

Top 3 Functional Annotations

Value Algorithm Source
NusA antitermination factor n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRP4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 499.0
  • Bit_score: 851
  • Evalue 3.50e-244
  • rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix. similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 499.0
  • Bit_score: 851
  • Evalue 4.80e-244
nusA; transcription elongation factor NusA similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 497.0
  • Bit_score: 646
  • Evalue 6.20e-183

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
ATGAATAAAGAAATCCTCCATGTTGTTGATGCAGTTTCCAATGAGAAAAATGTAACCAAAGACCTGATTTTTCAGGCCGTTGAAACTGCACTGGCGATGGCTACCCGTAAGCGTTATGGCATGGGTATGGATGTTCGCGTTTCTGTGAATCGCCAAACCGGTGATTACGATACGTTCCGTCGCTGGAAAGTGATGGATGACGAAGATCCTGAGTTTGAAACCCCTGAGCGTCAAATCCTCATTAGTTATGCTAAAGATCGTGGTTTAGATGTTGAGATTGGTTCTTATATTGAAGAGCCGATTGCATCCGTTGATTTTGGACGCATTGCTGCACAAACGGCTAAACAAGTTATCGTTGCCAAGGTGCGTGAGGCGGAACGTGAGAAAGTGGTTTCCGCGTACCGTGATCGTGTTGGTCAATTAGTCATGGGTGTGGTTAAACGTGGCGACCGTAAAGGTGTCGTGATTGACTTGGGTGAAAATGCGGAAGCTTTTATCCCGCGTGAAGAAATGATTCCGGGTGATAACCTGCATACCGGTGCGCGAGTGCGTGGTTTGCTTAAGGAAATACGCCAAGATGTGCGTGGTCCGCAGATGATTATCAGCCGTGCTGATGTTAATTTCCTGACGGAACTGATGAAATTGGAAGTTCCCGAAGTCAGTCAGGAAATGATTGATATTATGGGTGCGGCGCGTGACCCTGGTTCGCGTGCTAAAGTAGCAGTACGTGCCAACTTGCCTAACGTTGACCCGATTGGTGCTTGCGTTGGGATGCGTGGTTCACGTATTCAGACTGTTACTAATGAACTGGGTGGTAAAGAGCGCGTCGACATTGTGTTGTGGAATGACGATATTGCAACCTATGTGATGAACGCAATGGCTCCAGCCGAAGTGTTGTCGATCGTGGTGGATGAAGAAGCCCGCACGATGGATATTGGTGTTGACAGCGAAAAACTGTCGCAAGCTATTGGTCGTGGTGGACAAAATGTACGCCTCGCCAGTGATTTGACCGGCTGGATTCTCAATGTGATGAGCGTTGAAGAAGCCGAAGCGAAAACTCAAGCTGAGCAGCAAGCATTAATCAATTTGTTTATGGACAAGTTGGATGTTGATGAAGAAGTGGCTGGTATTCTTGCCGAAGAAGGTTTCTCAACACTGGAAGACGTAGCTTACGTTCCTGTTGAAGAGTTCCTAGCCATCGAAGGTTTCGACGCGGAAATCGTGGGTGAATTGCGCGATCGCGCACAAACTGCCCTGCTTTCCCAAGCTATTTCCCAAGACCAGCATTTGCCAGCAGAAGATTTGTTGCACATGGATGGTATGGATGAAGCACTCGCATTTAAACTAGCGACTAACGGTATCTGCACAATGGAAGATTTGGCAGAGCAAGCGGTAGACGAGCTGGTGGAAATCGGTGAAATTGATGAAACGCGAGCGGCGACGTTGATTATGACAGCACGCGCCCCTTGGTTTGCAGACGATAACAAGGCAGAAGCATGA
PROTEIN sequence
Length: 500
MNKEILHVVDAVSNEKNVTKDLIFQAVETALAMATRKRYGMGMDVRVSVNRQTGDYDTFRRWKVMDDEDPEFETPERQILISYAKDRGLDVEIGSYIEEPIASVDFGRIAAQTAKQVIVAKVREAEREKVVSAYRDRVGQLVMGVVKRGDRKGVVIDLGENAEAFIPREEMIPGDNLHTGARVRGLLKEIRQDVRGPQMIISRADVNFLTELMKLEVPEVSQEMIDIMGAARDPGSRAKVAVRANLPNVDPIGACVGMRGSRIQTVTNELGGKERVDIVLWNDDIATYVMNAMAPAEVLSIVVDEEARTMDIGVDSEKLSQAIGRGGQNVRLASDLTGWILNVMSVEEAEAKTQAEQQALINLFMDKLDVDEEVAGILAEEGFSTLEDVAYVPVEEFLAIEGFDAEIVGELRDRAQTALLSQAISQDQHLPAEDLLHMDGMDEALAFKLATNGICTMEDLAEQAVDELVEIGEIDETRAATLIMTARAPWFADDNKAEA*