ggKbase home page

ar4r2_scaffold_3392_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(1639..2106)

Top 3 Functional Annotations

Value Algorithm Source
Rare lipoprotein B n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BN13_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 164.0
  • Bit_score: 161
  • Evalue 6.70e-37
LPS-assembly lipoprotein LptE {ECO:0000256|HAMAP-Rule:MF_01186, ECO:0000256|SAAS:SAAS00074334}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; T similarity UNIPROT
DB: UniProtKB
  • Identity: 53.0
  • Coverage: 164.0
  • Bit_score: 161
  • Evalue 9.40e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGAAACAAATCGCTTCGTTTTGCGGAATACTGGTGTTGTTAGCAGGTTGCGGGGAACCGTTTCATTTGCGTGGCAACGCGCCGATGCCAAGCTTACAGCAGGGCGTTTATTTGCAGGGAATAAATACCCCGGCTGAGTTTAGCATTAAACAAGACCCTAAAGCGGCGCAAGTGACTGTTACCGTTAATAGTTACGATGAAAAGCGCACGGTATCGGGGTATTCCTCAACCCGGCAGGTACGTGAATTTAATCATGCGTTGGATGTGAGCTTTCGGGTTAGTGGTGAAGGTGTAACCGACCCGACAGAAGCGCGTTCAGTGCATGTGGAACGCACCCAGATCTACGATGGTACGAGCGTGCTTGGCTCATCCGAAGAAGAGGCGACTATTAAGCAGGATTTACGGCGTGAAGCGGCGCGGTTGCTATTGTTGCGGGTGCGTGCGGCAATTTCCAGCGCGGCGAAATAG
PROTEIN sequence
Length: 156
MKQIASFCGILVLLAGCGEPFHLRGNAPMPSLQQGVYLQGINTPAEFSIKQDPKAAQVTVTVNSYDEKRTVSGYSSTRQVREFNHALDVSFRVSGEGVTDPTEARSVHVERTQIYDGTSVLGSSEEEATIKQDLRREAARLLLLRVRAAISSAAK*