ggKbase home page

ar4r2_scaffold_3981_9

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(7239..8174)

Top 3 Functional Annotations

Value Algorithm Source
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxI similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 311.0
  • Bit_score: 552
  • Evalue 4.90e-154
Biosynthetic arginine decarboxylase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSY8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 311.0
  • Bit_score: 550
  • Evalue 7.90e-154
arginine decarboxylase similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 313.0
  • Bit_score: 391
  • Evalue 1.70e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
GTGTGTGAAGAATACGAGTTGCCATTCCCTGATTTTATCTCGGAATCCGGGCGTGGTTTGAGTGCGCACCACGCGGTGTTAATTACCAACGTGATTGATACTGACCCGCAACAGCCGGAAGCCGTACCGGTACTGCAAGAACCGGATAATGATGATCCGATGATTCTGCACAATTTGTACCGTTTGTATCACAATCGCAAGCAATTACCACCATCGGAAATTTACCACGATGCGGCGTATTGGCTGGATGAAGCGCACGGTATGTACGCGCATGGCTCGATTGATTTGAATCAGCGGGCAAGGGCAGAGGAGTTTCACCGCGCTATTTGCCACCAATTACTGGGAAAAACGGAATTGTTCGCCGCACTGGAGCCGGAAATTCAGACTAGCTTGCAGGAAAAATTAGCGGATAAATATTTCTGCAATTTCTCGCTATTCCAGTCAATGCCGGATGCGTGGGCCATTGAGCAAATCTTCCCGATTATGCCGTTGCATCGCTTACAGGAATGTCCTGATCGACGGGTGACGCTGCAAGATTTAACCTGCGATTCCGATGGTACAGTGTCGAATTACGTGGAAAGTGGACGATTGGAAACCACCTTGGCGTTGCATTCCCTGCAAAAAAGTCAGCCGTATTTACTGGGGATTTTCATGGTGGGCGCGTATCAGGAAATTCTGGGTGATTTACACAACTTGTTTGGCGATACGGATTCGATCAATGTAGAACTGCTCAATGATGGCAGCTATCGCCTGTCAGAACCGGAACGCGGCGACACCATTGATGAATTGTTGCGTTATGTGCATTTCGAGCCGAAGGATTTACTGGCACAATGCCGCCGTAAATTGGCAACAGCCGTCAACGACAGCGACCGACAAAAAACCTTGTTACGCGAAATCGAAGCAGGTTTGATCGGTTATACTTACTTGGAAGATTAA
PROTEIN sequence
Length: 312
VCEEYELPFPDFISESGRGLSAHHAVLITNVIDTDPQQPEAVPVLQEPDNDDPMILHNLYRLYHNRKQLPPSEIYHDAAYWLDEAHGMYAHGSIDLNQRARAEEFHRAICHQLLGKTELFAALEPEIQTSLQEKLADKYFCNFSLFQSMPDAWAIEQIFPIMPLHRLQECPDRRVTLQDLTCDSDGTVSNYVESGRLETTLALHSLQKSQPYLLGIFMVGAYQEILGDLHNLFGDTDSINVELLNDGSYRLSEPERGDTIDELLRYVHFEPKDLLAQCRRKLATAVNDSDRQKTLLREIEAGLIGYTYLED*