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ar4r2_scaffold_4914_10

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 5221..9303

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 999.99
  • Bit_score: 2465
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWS7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 999.99
  • Bit_score: 2465
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 999.99
  • Bit_score: 2118
  • Evalue 0.0

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4083
ATGGGACTGAGTTATACCGAAAAAAAACGAATCCGCAAAGATTTTGGGAAGCGACCACAAATTCTGGAAGTACCCGACCTGCTCACGATTCAGTTGGAGTCCTATCGGCAATTTTTGCAGTTGGACAAGCTGGTTGATGATCGTCGCAGTGTTGGTCTTCATGCGGCCTTTTCCTCTGTTTTTCCAATCGTCAGTTACAACAACTACGTTGCGTTAGAGTATGCTGATTACCGTTTGGCAGAGCCTGTGTTTGATGTACAGGAGTGCCAATTGCGTGGCTTGACGTTTGCTACGTCGCTGCGGGTGAAATTACGTTTGGTCATTTACGATAAAGATGCCCCTGCGGATGCCAAAGTCATTAAATCCATCAAGGAACAAGATGTTTACCTTGGTGAATTACCTTTGATGACAGATAAAGGCACCTTCATTATTAACGGGACTGAGCGCGTCATTGTTTCGCAGTTGCATCGCTCTCCCGGTGTGTTCTTTGAGCACGACAAAGGCAAATCTAACTCAGCCGGTAAACTGCTGCATAGTGCGCGGGTTATTCCTTACCGTGGTTCGTGGTTAGACTTTGAATTTGACCCGAAAGATTCCATTTTTGTGCGTATTGACCGTCGCCGCAAATTGCCTGCGACTATCTTGCTGCGTGCGTTGGGAATGCAAAACGAAGGAATCCTTGATTATTTCTTCGATAAAATTGCTATTCATCTGAGTGATAGTGCCATTGAGATGGAACTCGTTCCTGAGCGTTTGCGCGGTGAATTGGCATCGTTCGATATTATGCTGGATGGCGCAGTGTTGGTGGAAACCGGTCGTCGCATTACTGCGAAACACATCCGTCAACTGGAAAAGTCAGGTCTGGCGCGGCTGGTTGTGCCGCAAGACTATATGGGCGGCAAGATTTTAGCGCACAACATTATTGATTCCAGCACGGGCGAATTGTTGGCTAAGGCTAACGATGAAGTGACTGATGCCCTGTTGGAAAAGTTACGTGACAATAGCGTAAAAAGCTTCAGCGTGCTGTACACCAATGAGTTGGATCGCGGCCCGTTTATGTCCAACACCTTGAACATTGATAGTTCAAGCAGTGCATTGGAAGCGCAAATTGAAATTTACCGGATGATGCGTCCTGGTGAACCGCCGACCAAAGAATCGGCTGAAAATCTGTTCAACAACTTATTCTTCACTGACGACCGTTATGATTTGTCGGCAGTAGGTCGTATGAAATTCAACCGCCGTTTAGGGCGTGAAGAAGCGACCGGTGCGGGCGTGTTGGATCAGGGCGATATTCTGGCGGTGCTGAAAAAGCTGATCGACATCCGTGATGGCCGTGACGATGTGGATGATATTGACCACCTCGGCAACCGTCGTGTACGTAGCGTTGGTGAGATGGCGGAAAATGCCTTCCGTGTTGGCTTGGTGCGCGTTGAGCGTGCGGTCAAAGAACGCCTGACAATGGCTGAAAGCGAAGGCTTAATGCCGCAAGAGTTGGTGAATTCCAAACCGGTTTCAGCGGCAATCAAAGAATTCTTTGGTTCCAGCCAGTTGTCACAGTTTATGGACCAAAACAACCCGTTGTCAGAAGTGACTCACAAACGTCGTATTTCTGCATTGGGGCCGGGTGGTTTGACCCGTGAGCGTGCGGGCTTTGAGGTGCGTGACGTACATCCAACCCACTACGGTCGGGTTTGCCCAATCGAAACGCCGGAAGGTCCGAACATCGGCTTGATCAATTCCTTGGCGGTATACGCGCGTACCAATGACTACGGTTTCTTGGAAACGCCTTACCGCAAAGTTATTGACGGTAAGCCGACCATGCAGATTGATTATCTGTCAGCGATTGAAGAATCCAATTACGTTATCGCTCAGGCGAGTGCGGAACTGGATGAAAGCGGCTCCTTGTCTGATGAGTTCGTCTCTTGCCGTCATCGTAATGAATTTACCTTGATGCCTGCGGATAAAGTTCAGTACATGGACGTTTCGCCAAAGCAGATTGTTTCTGTGGCTGCTTCACTGATCCCGTTCTTGGAACACGATGACGCGAACCGCGCATTGATGGGTTCCAACATGCAACGTCAGGCAGTACCTTGTTTGCGTGCGGATAAACCGTTGTGCGGCACGGGCATGGAACGTGCGGTTGCACAGGATTCCGGTTCAGCCGTGACCGCGCGTCGTGGCGGGGTAATCGACTCTGTGGATGCGAGTCGTGTGGTGGTGCGGGTTAATGACGATGAAGCCAATGAAAAAGGCGGGGTCGACATTTACAGTCTGATCAAATACACCCGTTCCAACCAAAATACCTGCATTAACCAGCGTCCGATTGTGCGCGTGGGTGATCTGGTAGCGCGTGGCGATGTGCTGGCTGATGGTTCTTCCACTGACTTGGGTGAACTGGCGTTAGGACAGAATATGTTCATCGCGTTCATGCCTTGGAATGGCTACAACTACGAAGACTCGATTTTGCTGTCTGAGCGCGTGGTTGATGAAGACCGTTATACCTCGATTCACATCGAAGAAATGGCGTGTTTGGCGCGTGATACCAAGTTGGGACCGGAAGAAATTACGGCGGATATTCCTAACGTTAGCGAAAGTTTGCTGGCGAAGTTGGATGCCTGCGGAATTATCCACGTTGGTGCGGAAGTGAAGCCGAACGACATTCTGGTTGGCAAGGTAACACCGAAGGGTGAGAGCCAACTGACACCGGAAGAAAAGTTGTTGCGTGCAATTTTCGGTGAGAAAGCTTCTGACGTAAAAGATACCTCATTGCGTGTGCCAACAGGGATGGCGGGTACGGTTATCGACGTCCGCGTATTTACCCGTGATGGCGTTGAGCGTGATGCGCGTGCCTTAGCGATTCAGGAAGAAGATTTAAAGAAAGTCCGTAAAGACTTGCGCGATGAATTGCGTATTTACGAAGCTGACATCTTCGACCGTTTTGCGAAACTGGTGGTTGGTAAAGAAGCCGTGGGTGGCCCCAACCGCTTAACTTCCGGCACAGTGATTACTCAGATGTATCTGGATAATCTGGAGCATAAGGATTGGTTCGCGATCCGTATGCAAGATGAAGACATCAACGTGCAGTTAGAAGCGTTGAGCCAACAGGTTGACGAGAAGAAAAAGCACTATGAAACGCGCTTACAAAAGCAGCGTGACAAACTGATGGCGGGTGATGACCTTGCTCCGGGTGTGCTGAAAATGGTCAAGGTTTACATTGCGGTTAAACGCCGGATGCAGCCGGGTGACAAAATGGCAGGTCGTCACGGTAACAAGGGTGTGGTTTCACGCATTGTTCCGGTAGAAGACATGCCGTATCTGGAAAATGGTCAAACTGTTGACATCGTGCTGAACCCATTGGGCGTTCCGTCACGGATGAACGTCGGTCAGGTTTTGGAAACCCACTTAGGTTGGGCAGCTAAAGGCTTGGGCGAGAAAATTGGACGCATGATTGATGCGAAAGCACGCATTGACGAGTTGCGCCAATTTATCAGCGAAGTTTACGCTACCGGCGGCAATCCTAATCAAGATCACGTCATTGAAGAAATGACGGATGATGAGGTGATTGCGCTGTCTGCCAATTTACGCAAAGGCGTGCCGATGGCAACGCAGGTGTTTGACGGTGCGGCGGAATCTGAAATTAAAGCCATGTTGCGCTTGGCAGATTTGCCGGAAAGCGGTCAAACCTTGCTGCACGACGGGCGTACTGGTGATGCATTTGAGCGTAAAGTAACCGTGGGTTACATGCATATGCTGAAACTCAACCACTTGGTTGATGACAAAATGCACGCACGTTCAACCGGGCCATACAGTCTCGTTACGCAGCAGCCATTGGGCGGTAAAGCACAATTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTCTGGGCACTGGAAGCTTACGGTGCGGCTTATACCTTGCAAGAAATGCTTACGGTTAAGTCGGATGACGTGAACGGACGTAACAAGATGTATAAAAACATCGTTGACGGCGATCACTACATGGAAGCCAGTATGCCTGAGTCCTTCAACGTGTTGATGAAGGAAATCCGCTCGCTGGGTCTGAATATCGAACTGGAACGGGATTAA
PROTEIN sequence
Length: 1361
MGLSYTEKKRIRKDFGKRPQILEVPDLLTIQLESYRQFLQLDKLVDDRRSVGLHAAFSSVFPIVSYNNYVALEYADYRLAEPVFDVQECQLRGLTFATSLRVKLRLVIYDKDAPADAKVIKSIKEQDVYLGELPLMTDKGTFIINGTERVIVSQLHRSPGVFFEHDKGKSNSAGKLLHSARVIPYRGSWLDFEFDPKDSIFVRIDRRRKLPATILLRALGMQNEGILDYFFDKIAIHLSDSAIEMELVPERLRGELASFDIMLDGAVLVETGRRITAKHIRQLEKSGLARLVVPQDYMGGKILAHNIIDSSTGELLAKANDEVTDALLEKLRDNSVKSFSVLYTNELDRGPFMSNTLNIDSSSSALEAQIEIYRMMRPGEPPTKESAENLFNNLFFTDDRYDLSAVGRMKFNRRLGREEATGAGVLDQGDILAVLKKLIDIRDGRDDVDDIDHLGNRRVRSVGEMAENAFRVGLVRVERAVKERLTMAESEGLMPQELVNSKPVSAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAVYARTNDYGFLETPYRKVIDGKPTMQIDYLSAIEESNYVIAQASAELDESGSLSDEFVSCRHRNEFTLMPADKVQYMDVSPKQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRADKPLCGTGMERAVAQDSGSAVTARRGGVIDSVDASRVVVRVNDDEANEKGGVDIYSLIKYTRSNQNTCINQRPIVRVGDLVARGDVLADGSSTDLGELALGQNMFIAFMPWNGYNYEDSILLSERVVDEDRYTSIHIEEMACLARDTKLGPEEITADIPNVSESLLAKLDACGIIHVGAEVKPNDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDTSLRVPTGMAGTVIDVRVFTRDGVERDARALAIQEEDLKKVRKDLRDELRIYEADIFDRFAKLVVGKEAVGGPNRLTSGTVITQMYLDNLEHKDWFAIRMQDEDINVQLEALSQQVDEKKKHYETRLQKQRDKLMAGDDLAPGVLKMVKVYIAVKRRMQPGDKMAGRHGNKGVVSRIVPVEDMPYLENGQTVDIVLNPLGVPSRMNVGQVLETHLGWAAKGLGEKIGRMIDAKARIDELRQFISEVYATGGNPNQDHVIEEMTDDEVIALSANLRKGVPMATQVFDGAAESEIKAMLRLADLPESGQTLLHDGRTGDAFERKVTVGYMHMLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRNKMYKNIVDGDHYMEASMPESFNVLMKEIRSLGLNIELERD*