ggKbase home page

ar4r2_scaffold_4629_15

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 9215..9901

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003817C1D similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 236.0
  • Bit_score: 231
  • Evalue 7.70e-58
Polysaccharide export protein {ECO:0000313|EMBL:EIJ34241.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 226.0
  • Bit_score: 204
  • Evalue 1.40e-49
outer membrane xanthan exporter similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 214.0
  • Bit_score: 176
  • Evalue 8.30e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGAAAATGAACAAGTTTTACACGACTCTATTGCTAGCCGTTTTTTTTGTCACCAGTGGATGCAGCAATCAGTCATTCTCCACAGATAACCTAGCCTCACCTAACACCCTCATGCAAACATCAGGTGTTGAAGATTACCGCATTGGTGCAGCGGATTTGTTGGACATCAAGGTGTTCCAAGCCGATGAGTTGTCACGCGAAGTTCGGGTCGATGCTCATGGCAATATCACCTTACCCCTAGTCGGCAAAATTCCTGTTGCGGGTTTGACTCAAAGTGAAGCCGAACAAAAACTCGCAAGTATCATGCAGCGGAATCTTTTGCAAAATCCGCAAGTTACCGTATTCATTAAAGAATTCACCTCGCAACGGGTAACGGTGGAAGGCCAAGTCAAAAAGCCGGGGGTATACCCGCTTGCTGGACAAACCAGTGTGTTACAGGCCATCGCGATGGCGGAAGGGCCTAGTGAGTTGGCAGCCACTGACAAGGTAGTGTTATTCCGTCGTCAAGGCAACCAAAGCAAAGCCCACTTAATTGATTTAAATGCTATCCGTAACGGCAAAGCTCCTGACCCGTATGTGCGTAACGATGATCGTATTGTGATACACCGCTCTGACAGCCGCTTTTGGATACGAGAAACAGCAACACTACTCAGCCCCTTCGCGACACTGAATGGTCTTATTAATTAA
PROTEIN sequence
Length: 229
MKMNKFYTTLLLAVFFVTSGCSNQSFSTDNLASPNTLMQTSGVEDYRIGAADLLDIKVFQADELSREVRVDAHGNITLPLVGKIPVAGLTQSEAEQKLASIMQRNLLQNPQVTVFIKEFTSQRVTVEGQVKKPGVYPLAGQTSVLQAIAMAEGPSELAATDKVVLFRRQGNQSKAHLIDLNAIRNGKAPDPYVRNDDRIVIHRSDSRFWIRETATLLSPFATLNGLIN*