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ar4r2_scaffold_4961_3

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 2006..2875

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWY0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 289.0
  • Bit_score: 500
  • Evalue 8.70e-139
  • rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 289.0
  • Bit_score: 500
  • Evalue 1.20e-138
RNA polymerase factor sigma-32 similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 286.0
  • Bit_score: 379
  • Evalue 8.20e-103
  • rbh

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGACCAACGCATTGATGCTAAGAGGACAAACCTTACCCGTTCCGGTAGGTAATCTGGAAAGTTACATCCATGCGATTCACGCCATTCCAGTGCTTGATGTCGAGCAGGAACGCGGTTTGGCGGAACGCCTCAAATACCACGATGATTTGGAAGCTGCACGTCAGTTGATTTTGCACAATTTACGCTTTGTGGTGAAAGTGGCGCGTGGTTACAACGGCTACGGCTTGCCTTTGGGCGATTTGGTGCAAGAGGGTAATGTCGGCTTGATGAAGGCGGTGAAACGCTTTGACCCGGAAATGAACGTGCGCCTGATTTCGTTTGCAGTGCATTGGATTCGTGCGGAAATCCACGAATTTATTCTGCGTAACTGGAAAATTGTCAAAATCGCCACTACCAAAGCGCAACGTAAGTTGTTCTTTAATTTGCGCAGTAGCAAGCAACGCATGGGCTGGTTGAACCACGAAGAAGCGCAGTCGATGGCTAACGATTTAGGGGTGACAACCGCTGAAGTGTTGGAAATGGAAAAGCGTTTGAGTGCCAGCGACGTATCGTTTGACTTGAGTGCTGATCATGACGATGACGATTCCGCAAGTTTTTCACCCAGTCAGTATTTGGCTGCGGAATCTGCTGATCCCTCGGAGCGGTTAGAAGCGGAAGAGTGGGACAGTTTTACCCGCGAGCGTTTGCAGACAGCGTTAAAGGGATTGGATGCGCGTAGCCAAGACATTTTAGCCAGTCGTTGGTTAGTCGAGGAAAAAGCAACACTGCATGAGCTGGCTGCGAAATATAACGTTTCTGCGGAACGGATTCGTCAACTGGAAAATGCGGCGGTGAGCAAGTTGCGGTTGGCAGTTGTCGAGGCGGCTTGA
PROTEIN sequence
Length: 290
MTNALMLRGQTLPVPVGNLESYIHAIHAIPVLDVEQERGLAERLKYHDDLEAARQLILHNLRFVVKVARGYNGYGLPLGDLVQEGNVGLMKAVKRFDPEMNVRLISFAVHWIRAEIHEFILRNWKIVKIATTKAQRKLFFNLRSSKQRMGWLNHEEAQSMANDLGVTTAEVLEMEKRLSASDVSFDLSADHDDDDSASFSPSQYLAAESADPSERLEAEEWDSFTRERLQTALKGLDARSQDILASRWLVEEKATLHELAAKYNVSAERIRQLENAAVSKLRLAVVEAA*