ggKbase home page

ar4r2_scaffold_5060_9

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(7164..7466)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BTJ8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 95.0
  • Bit_score: 118
  • Evalue 4.20e-24
Helix-turn-helix domain protein {ECO:0000313|EMBL:EIJ34691.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 95.0
  • Bit_score: 118
  • Evalue 5.90e-24
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 90.0
  • Bit_score: 94
  • Evalue 1.80e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGGATAAACGCTACAAACCCGTATCCGTGCCAGAACAAGTACGACAACGGGTAGCTTTACTGGAAAGCATCACGAATCAACCGGGAATGTCGCTCACCCAAGCCGTGCGAGAACTCCGCACCGGGTTGCGCTTGACTGTGCCGGAATACGCCAAGCTTACTCAGGTTGCGGTTCGCACTATTCACGATATTGAAGCAGGCAAAGCAAACCCTTCACTGGCGACTGCCAATAAATTATTAGCACCGTTTGGATTAATGTTGGGTGTCGTCAAACCACAAGGAGACCGCCATGAAAGTTCTTAA
PROTEIN sequence
Length: 101
MDKRYKPVSVPEQVRQRVALLESITNQPGMSLTQAVRELRTGLRLTVPEYAKLTQVAVRTIHDIEAGKANPSLATANKLLAPFGLMLGVVKPQGDRHESS*