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ar4r2_scaffold_5492_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(1042..2184)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=870187 species="Bacteria; Proteobacteria; Gamm similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 378.0
  • Bit_score: 579
  • Evalue 2.70e-162
Ribonuclease D (EC:3.1.26.3) similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 377.0
  • Bit_score: 346
  • Evalue 1.00e-92
Ribonuclease D n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BTN9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 378.0
  • Bit_score: 579
  • Evalue 1.90e-162

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1143
ATGTTTGAATACATCAGCACCCCGCAACAACTCAATGATTTAATGACCCGTTTGGATAATGCCGAATGGGTAACGCTGGATACCGAGTTTATTCGTGAAAAAACCTATTTTCCGCGCCTTTGCCTGATTCAGATTGGCAGTACCGATACGCTGGCGTGCATTGATCCGTTAGCAATTACGGATTTGCGTCCGTTTTTAACTTGGCTACAAGACCCTAAACGCCTGAAAGTGTTACACGCCGCTTGGCAGGATATGGAAATCTTCCACCATTTGGGGCAAGGGGAATTGCCCAGCCCGTTGTTTGATACCCAAATTGCAGCAGCGGTGTTGGGCATGGGTGATCAAATGGGTTACGCCCGTTTGGTGGAAGGCGTTTTGGGCATTACCTTGGATAAATCGCAATCACGTACCGATTGGTCACGCCGCCCCTTGAGCAAAGCCCAACTGGAATACGCGATTGATGATGTGCGCCATTTACGTGATGTTTACCTTGCCTTGCGTGAACAACTGCAACAATTAGGGCGGATGAAGTGGTTGGATAAACCGTTTCAGAAGTTGGCGGATGCCAATACTTACAACATTGATCCGCAAACGTGTTGGGAGCGCATCCGGGGTTTACAGGTATTAAAACCGCATCAACTCGCGGTATTGCGTGAATTAGCGGCATGGCGTGAACAACGGGCGTTGCAGAAAGATTTACCACGTCGCTGGTTATTATCGGACGAAATTCTGCTGGATATGGCACGGATGCAGCCGGATAGCGCGGAAGGTTTGCGCCATATTCGTGGCTTAAGTGATGAGCAAATCGAGCGTGGTGCAGCGGAATGGCTAGGCTGTATTGCGCGGGGTAAAGCGGTGCCGAAGAGCGAATGGCCGAATCTGCCACGTCGCCGTAAGCTGGATGAAAACATGAGTGTGGTTGCGGATTTGCTGACGGCGGTGTTGAATCAGATTGCCAATGAAAACGGCATTTCCGCACAAATGATTGCCACCCGTCAGCAACTGGAAAAGATGCTGGAAGAAGGCCGCACCACTCTATCTGATGATTGGCGCGGCGCGTTGGTCAATGATGCGTTTACCGCACTGCTGTCCGGCAAAGCGCAAGTCAGCGTGCAGCAACAGCGGGTAGTGATTGCCGCTTAA
PROTEIN sequence
Length: 381
MFEYISTPQQLNDLMTRLDNAEWVTLDTEFIREKTYFPRLCLIQIGSTDTLACIDPLAITDLRPFLTWLQDPKRLKVLHAAWQDMEIFHHLGQGELPSPLFDTQIAAAVLGMGDQMGYARLVEGVLGITLDKSQSRTDWSRRPLSKAQLEYAIDDVRHLRDVYLALREQLQQLGRMKWLDKPFQKLADANTYNIDPQTCWERIRGLQVLKPHQLAVLRELAAWREQRALQKDLPRRWLLSDEILLDMARMQPDSAEGLRHIRGLSDEQIERGAAEWLGCIARGKAVPKSEWPNLPRRRKLDENMSVVADLLTAVLNQIANENGISAQMIATRQQLEKMLEEGRTTLSDDWRGALVNDAFTALLSGKAQVSVQQQRVVIAA*