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ar4r2_scaffold_8908_5

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 3343..5148

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 601.0
  • Bit_score: 1079
  • Evalue 0.0
Elongation factor 4 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPH5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 601.0
  • Bit_score: 1079
  • Evalue 0.0
  • rbh
GTP-binding protein LepA similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 597.0
  • Bit_score: 895
  • Evalue 9.30e-258

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1806
ATGGGTGAGGCGAACAAGAACATCCGCAACTTTTCGATTATTGCGCATATTGACCACGGTAAATCGACACTTTCCGACCGCTTTATTCAGTATTGCGGTGGTTTAGAACAGCGTGAAATGGAAGCACAAGTACTGGATTCTATGGATCTGGAGCGTGAGCGCGGCATTACTATTAAGGCGCAGAGCGTCTCACTGGATTACAAAGCGCGTAATGGCGAAACCTATCATTTAAACTTTATCGACACCCCGGGGCACGTGGACTTTTCTTATGAAGTTTCACGTTCATTGTCCGCTTGCGATGGCGCATTGCTGGTGGTGGATGCGTCGCAAGGTGTGGAAGCGCAAAGTGTTGCCAACTGCTACACCGCGATTGACCTGAATCTGGAAGTTGTCCCCGTCCTCAATAAAATTGACTTGCCTGCGGCTGATCCTGACCGTGTGTGCCAAGAAATCGAAGATATTATTGGCATTGATGCATCGGAAGCGATTCACGTCAGTGCTAAAAGCGGCATCGGTATTGAAGACCTGCTCGAACAGTTGGTGCAACGCATTCCGCCACCCGTAGGCGACCCCGATGCGCCGCTAAAAGCCTTGATCATCGACTCATGGTTTGACAACTACCTTGGCGTGGTGGTGTTGGTGCGGGTGATTGATGGCGAAATCCGCAAAAAAATGAAAATCCGCTTTATGTCCAGCGGGCGTGATTTCCAAGTCGAACGTGTCGGCGTGTATACCCCGAAAATGAAAGATTTGGACGTATTACGCGCGGGTGAAGTGGGTTTCATGATTTCCGGCATCAAGGAAATCGCCGTTGCAAAAGTGGGCGACACGCTTACCGATGCGCAACGTCCAGCCAGTGTTCCGTTACAAGGCTTTAAGGAAATTCAGCCACGTGTTTTCGCTGGTTTGTTCCCGATTGAATCGGATCAATACGAAAACTTGCGTGACGCGCTTTCCAAGCTGAAATTGAACGATTCCGCGCTATTCTATGAACCAGAAACTTCGCAAGCCTTGGGCTTTGGTTTCCGTTGCGGCTTCTTGGGTATGTTGCACATGGAAATCGTGCAAGAGCGTTTGGAACGCGAATACAACCTTGATCTGATTTCCACCGCGCCCACGGTTATTTACGAAGTCGTATTGACCAATGGCGAGAAAAGTTTCATCCACAGCCCGTCTGAATTGCCACCGATTAATAAGTTGGCGGAAATCCGTGAGCCGATCATTGTGGGGACGATTCTCGTGCCACAAGAGTACGTGGGCAACGTGATTACCCTGTGCATTGAAAAGCGCGGCGTACAAAAGAATATGCAGTACATGGGTGCGCAAGTGTCGCTGACCTTTGAATTGCCGTTAGCTGAAGTGGTCATGGACTTTTTTGACCGCCTGAAATCGTGCAGCCGTGGTTATGCGTCATTCGATTACGCGATGAACCGTTTTGAAGCCGCTCCAATGGTGCGCGTTGATGTGCTGGTAAATGGTGAAAAAGTTGACGCATTGGCGTTGATGATTCACCGCGACTTCGCGCAGTCTCGCGGGCGTATGTTGGTAGAAAAGATGAAAGACCTGATTCCACGCCAGATGTACGAAGTGGCGATTCAGGCAGCAATTGGCAGCAATATTATTGCCCGCAGCACCGTCAAAGCGATGCGCAAAGACGTAACGGCGAAATGTTATGGCGGTGACGTGAGCCGTAAGCGCAAGTTGCTGGAAAAGCAAAAAGAAGGCAAAAAACGCATGAAGCAGGTCGGCAGCGTGGAAATTCCACAAGAAGCCTTCCTCGCTGTGCTAAAAGTTAGTGACAAGTAA
PROTEIN sequence
Length: 602
MGEANKNIRNFSIIAHIDHGKSTLSDRFIQYCGGLEQREMEAQVLDSMDLERERGITIKAQSVSLDYKARNGETYHLNFIDTPGHVDFSYEVSRSLSACDGALLVVDASQGVEAQSVANCYTAIDLNLEVVPVLNKIDLPAADPDRVCQEIEDIIGIDASEAIHVSAKSGIGIEDLLEQLVQRIPPPVGDPDAPLKALIIDSWFDNYLGVVVLVRVIDGEIRKKMKIRFMSSGRDFQVERVGVYTPKMKDLDVLRAGEVGFMISGIKEIAVAKVGDTLTDAQRPASVPLQGFKEIQPRVFAGLFPIESDQYENLRDALSKLKLNDSALFYEPETSQALGFGFRCGFLGMLHMEIVQERLEREYNLDLISTAPTVIYEVVLTNGEKSFIHSPSELPPINKLAEIREPIIVGTILVPQEYVGNVITLCIEKRGVQKNMQYMGAQVSLTFELPLAEVVMDFFDRLKSCSRGYASFDYAMNRFEAAPMVRVDVLVNGEKVDALALMIHRDFAQSRGRMLVEKMKDLIPRQMYEVAIQAAIGSNIIARSTVKAMRKDVTAKCYGGDVSRKRKLLEKQKEGKKRMKQVGSVEIPQEAFLAVLKVSDK*