ggKbase home page

ar4r2_scaffold_8191_1

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(3..1229)

Top 3 Functional Annotations

Value Algorithm Source
General secretion pathway protein D n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXH1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 414.0
  • Bit_score: 604
  • Evalue 7.90e-170
  • rbh
General secretion pathway protein D {ECO:0000313|EMBL:EIJ36064.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 414.0
  • Bit_score: 604
  • Evalue 1.10e-169
general secretion pathway protein D similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 412.0
  • Bit_score: 259
  • Evalue 2.30e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1227
ATGTCCGCGTGCACTTCCATTAAAGGCAGCCCAGGCTATCGTGACAACACCAAATCCGGTGGTTTTCAACGCAGTGCCGCAATCAAAGAATTAAACGATGCAACTTACAGCCATCCCGTGCTGCGACCGGCTAGTGCGCCCAAGGTGCAACCTGCGAATTACCAAACCGCCGCACCTGCAACGACAACACCAGCGTGGGATGCAATGCAACCTTCCGCTGCTGCACCTGCGGGCAACGCCAATAAAACCGATGATATGGAATTGATCCTCGGCACGCAGGATTATTACCGTTCCGATGTGAAACGTCCCGCCGTGGCCAATTCTGTTAAAAGTAAAGGCAGCGGTGTGGCTCTCAACTTTGAACGAGCCAGCATCCGTGAAGTGGTGAAGGTGGTGCTGGGCGATATTTTAAAGCAAACCTACACCGTTGAGCCGGGTGTTGAAGGCGAAGTGACCATCAGCTCCACGGATCCCATTGATCGCGATGCCTTGATTCCGACGCTGGAATCGTTGCTGCAAACCCAAGGGGCGGTGCTTTACAAAGATGATACTGGCAACTTCCGGGTGGCGGCGCGTGCCAATATCAAAGGGCGCGGCTTAATGCCTTCCACTGGCTCGATTAAGCCCGGTTACAGTATGCAGGTCATTACCCTGCGCTACATTCCGGCGGCAGAAATGCAGAAAATTCTGGAACCGATTGCGAGTCCCGATGCGTTTGTGCGGGTTGACCCGAACCGTAATATGCTGGTGTTGGCTGGTACGAGTTCCGAGCTGGCTAATTTAAGTGCCACGATTAAAACCTTTGACGTGGATGTGTTGAAAGGCATGTCCGTAGGTTTATACCGCGTTAAAAATGTCGAAGCCGCTATCGTGGCGAAAAATCTTGACGCACTGTTCGGTGAAAGCGGCAATAGCCCGATGGCAGGTATGATTAAAATCATGCCGATTGAGCATATGAACAGCATTATGATTATTTCTGCGAATCCTGATTACCTCAAAGATATGAAGGATTGGGTAGATCGTTTTGATCAGGTTAGCCCCACCGCAGGGCAGCAATTGTTTGTTTACCATGTGCAAAATGGCAGTGCCGAACATTTGGCAGAAATGCTGAATCAGGTGTTTGGCGGTAAAAAAAGCTCCAACAGTAAATTGCCGGGTGATGCGAATACCAGCAGTCTTGCACCCGGTTTGACTCCGGCTTCAGTTGGTGCAGATGGGCAACCCGTT
PROTEIN sequence
Length: 409
MSACTSIKGSPGYRDNTKSGGFQRSAAIKELNDATYSHPVLRPASAPKVQPANYQTAAPATTTPAWDAMQPSAAAPAGNANKTDDMELILGTQDYYRSDVKRPAVANSVKSKGSGVALNFERASIREVVKVVLGDILKQTYTVEPGVEGEVTISSTDPIDRDALIPTLESLLQTQGAVLYKDDTGNFRVAARANIKGRGLMPSTGSIKPGYSMQVITLRYIPAAEMQKILEPIASPDAFVRVDPNRNMLVLAGTSSELANLSATIKTFDVDVLKGMSVGLYRVKNVEAAIVAKNLDALFGESGNSPMAGMIKIMPIEHMNSIMIISANPDYLKDMKDWVDRFDQVSPTAGQQLFVYHVQNGSAEHLAEMLNQVFGGKKSSNSKLPGDANTSSLAPGLTPASVGADGQPV