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ar4r2_scaffold_8270_10

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 5800..6855

Top 3 Functional Annotations

Value Algorithm Source
lysA; diaminopimelate decarboxylase (EC:4.1.1.20) similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 345.0
  • Bit_score: 466
  • Evalue 8.10e-129
Diaminopimelate decarboxylase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWP2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 343.0
  • Bit_score: 582
  • Evalue 2.80e-163
  • rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120 similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 343.0
  • Bit_score: 582
  • Evalue 3.90e-163

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGGATCATTTTGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGGTTCGGGCTTTGACATCGTGTCAGCGGGGGAATTGGAGCGGGTATTACGTGCTGGCGGCGACCCCGGCAAGGTGGTGTTTTCCGGCGTTGGCAAAAAAGCCGCAGAAATCCGTAAGGCGTTGGAAGTCGGTATCCGCTGTTTCAACGTCGAATCCGAAGCCGAGCTTGACCGCATCAACGCGGTAGCGGGCGACATGGGCAAAATCGCGCCGATTTCCTTGCGCGTCAACCCTGACGTGGATGCGCAAACCCACCCCTACATTTCCACCGGCCTGAAAGAAAATAAGTTCGGCGTTGAAATCAGCCGCGCCGAAGAAATTTACCTGAAAGCCGCTGCGATGCCACACCTGAACGTAGTCGGGATTGACTGCCACATCGGTTCGCAATTGCTGACACTTTCACCGTTTATGGACGCGCTGCAACGGGTAGTGCATCACCTCGACATCGGCGGCGGCTTGGGCGTGCGTTACCGCGAAGGTCAAGAAGCCCCCAGCCCAGCGGATTACATGGCACAATTGTTCACCGACGAACGTCTGCGCCAATACGAAATTTTCGTCGAACCGGGTCGGGCAATCGCTGCCAACGCCGGAATTTTAGTCACAGAAGTCGAATTCCTGAAACTGGCGGAATACAAAAATTTCGCCGTCGTCGATGCCGCGATGAACGACCTAATCCGCCCTGCGTTGTACAGTGCTTGGCAAGAAATCATCCCCGTGATACCGCGTGAGGGCGAAACTGCCACTTACGACATCGTAGGGCCGGTGTGCGAAACGGGCGACTTTTTGGGCAAAGAACGTGACTTAAACATCCAAGCGGGCGACTTACTGGCGGTACGTTCATCCGGTGCGTATGGTTTCACCATGGCTTCCAACTACAACACCCGCCCACGTGCTGCGGAAGTGATGGTGGATGGCGATACGGTGTATGTGGTACGCCAGCGCGAAACGCTGGATGATCTGTTGCGTGGTGAAAGTGTGCTACCCGCATGA
PROTEIN sequence
Length: 352
MDHFEXXXXXXXXXXXXXXXXLGSGFDIVSAGELERVLRAGGDPGKVVFSGVGKKAAEIRKALEVGIRCFNVESEAELDRINAVAGDMGKIAPISLRVNPDVDAQTHPYISTGLKENKFGVEISRAEEIYLKAAAMPHLNVVGIDCHIGSQLLTLSPFMDALQRVVHHLDIGGGLGVRYREGQEAPSPADYMAQLFTDERLRQYEIFVEPGRAIAANAGILVTEVEFLKLAEYKNFAVVDAAMNDLIRPALYSAWQEIIPVIPREGETATYDIVGPVCETGDFLGKERDLNIQAGDLLAVRSSGAYGFTMASNYNTRPRAAEVMVDGDTVYVVRQRETLDDLLRGESVLPA*