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ar4r2_scaffold_9518_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 709..1428

Top 3 Functional Annotations

Value Algorithm Source
RNA pseudouridine synthase family protein (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 231.0
  • Bit_score: 290
  • Evalue 4.20e-76
Pseudouridine synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BW87_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 236.0
  • Bit_score: 325
  • Evalue 4.10e-86
Pseudouridine synthase {ECO:0000313|EMBL:EIJ35630.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205. similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 236.0
  • Bit_score: 325
  • Evalue 5.80e-86

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCTAGAAATCCTCTACCAAGATGCTCACCTCGTTGCCATCAACAAACCTTCGGGTCTGTTGGTGCATCGCAGCCTGATTGACCGCCACGAAACGCGCTTTGCGATTCAGCTTACCCGCGACCAGATTGGGCAAAAAGTTTACCCGGTGCATCGGCTGGATAAACCCACGTCGGGGGTATTGCTGTTCGCGCTTGATAGCGACACCGCACGGCTGATCAATGCGCAATTTACTGCTGGGCAAGTGCAGAAAACCTACCAAGCCATTGCGCGTGGGTTTGTTCTCGACAATGGGGTGATTGATCACCCGTTGCGTGAACAGTTGGACGCACTGGCGGATGCCGACGCAGACACCGATAAAGACGCACAAACCGCGTTGACCCATTACCGGCGATTGCAGGCGTTTGAAGTGCCGTTCGCAGTTGATCGCCACCCGACCAGTCGTTATTCCTTGGTGGAGCTATGCCCCAAAACAGGGCGCAAGCACCAATTGCGCCGCCACATGAAGCACATTTCCCACCATTTGATCGGTGACACCACCCACGGCAACGGTAAACACAACCGTTTTTTCCGTGAACAGTTTGGCAGCTCACGTTTATTGCTGCACGCCACCCAGCTTTGCTTAAAACACCCGCACAATCATGAAAACTTACTGATTCAAGCGAAGTTTCCCGCAGACTTTGATGAGGTGGTACGGTTATTGCTTCCTTTCCAACAGTAA
PROTEIN sequence
Length: 240
MLEILYQDAHLVAINKPSGLLVHRSLIDRHETRFAIQLTRDQIGQKVYPVHRLDKPTSGVLLFALDSDTARLINAQFTAGQVQKTYQAIARGFVLDNGVIDHPLREQLDALADADADTDKDAQTALTHYRRLQAFEVPFAVDRHPTSRYSLVELCPKTGRKHQLRRHMKHISHHLIGDTTHGNGKHNRFFREQFGSSRLLLHATQLCLKHPHNHENLLIQAKFPADFDEVVRLLLPFQQ*