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ar4r2_scaffold_7261_5

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(3661..4293)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thi similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 183.0
  • Bit_score: 263
  • Evalue 3.10e-67
rsmE; ribosomal RNA small subunit methyltransferase E (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 181.0
  • Bit_score: 155
  • Evalue 1.80e-35
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BTY5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 183.0
  • Bit_score: 263
  • Evalue 2.20e-67

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGAGCAATATCAGCAAACGTTCTGCGTCTGTGCTGATCGACAAATTTTCCGCGATTGACACCGAATCTACCGTCCACCTCACCCTCGTGCAAGCCGTCATCAAGCCCGACAAGATGGATTTTGCCCTACAAAAAGCCGTGGAGTTGGGGGTAAACACCATTCAGCCGCTAATCACGCACCGCAGCGTAGTCCGCATCGGCAAAGAGCAGGTGGATAAAAAATTGCAGCATTGGGAAGGCATTGTCGTGGCGGCGTGCGAACAATCGGGGCGTACCCGAATGCCGACCGTGCAAACACCGTTAACGCTCGAACGTTGGCTAGAAACGCCGTTTGCAGGTACTCGGATGATTCTTGCGCCCGGTGATTTTCCGCGCATTAACGCCCTACCCGCAGACTTACCCACACCGATTGCGCTATTGATTGGCCCTGAAGGTGGGTTTACCGATGAAGAAGTGGAAACTTGTGTGCAAGCAGGGGGAATGCCCGTCTCGTTAGGGCCACGGATATTGCGGGCGGAAACGGCGAGTAGCGGATTTGTAAACTTACTCTTCCACTTGGGAAGGCAGCGCATCACTGGCTTGTTGCATATAGTTTTCCAGCGATACGGTGGGTGCTGCGTGCAGATTAAATGA
PROTEIN sequence
Length: 211
MSNISKRSASVLIDKFSAIDTESTVHLTLVQAVIKPDKMDFALQKAVELGVNTIQPLITHRSVVRIGKEQVDKKLQHWEGIVVAACEQSGRTRMPTVQTPLTLERWLETPFAGTRMILAPGDFPRINALPADLPTPIALLIGPEGGFTDEEVETCVQAGGMPVSLGPRILRAETASSGFVNLLFHLGRQRITGLLHIVFQRYGGCCVQIK*