ggKbase home page

ar4r2_scaffold_7037_4

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(3449..3664)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 72.0
  • Bit_score: 113
  • Evalue 1.00e-22
rpoZ_[H]; DNA-directed RNA polymerase omega subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 70.0
  • Bit_score: 96
  • Evalue 3.40e-18
DNA-directed RNA polymerase subunit omega n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSX3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 72.0
  • Bit_score: 113
  • Evalue 7.40e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
ATGGCACGTATTACCGTTGAAGACTGCCTCGCGCACGTCGATAACAATTTTGCATTGGTTTTGAAAGCAGCGAAACGCGCACGCGACATTTCCCACGGCGCACAACCTTTGGTTCCTGAAGAAGGTGATAAACCTACGGTGGTTGCCTTGCGTGAAATCGCCGAAGGTTTGCTAAACCCGAAGCCAGTGGTCGTCACACTGCCTGATCAGGATTAA
PROTEIN sequence
Length: 72
MARITVEDCLAHVDNNFALVLKAAKRARDISHGAQPLVPEEGDKPTVVALREIAEGLLNPKPVVVTLPDQD*