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ar4r2_scaffold_8684_1

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 2..637

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E (GspE) n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRA6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 211.0
  • Bit_score: 322
  • Evalue 4.00e-85
Type II secretion system protein E (GspE) {ECO:0000313|EMBL:EIJ33899.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thioth similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 211.0
  • Bit_score: 322
  • Evalue 5.70e-85
general secretory pathway protein E similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 210.0
  • Bit_score: 282
  • Evalue 1.00e-73

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
GAATATTACATCGACGGTATCGGGCAAACTCAAGTCAATAACAAAGTTGATATGACGTTTGCGCGGGGTTTGCGAGCGATTTTACGCCAAGACCCGGATGTGGTGATGATTGGTGAAATTCGCGATCTGGAAACGGCTGAAATTGCGGTGCAAGCCAGTTTGACTGGGCATTTGGTGTTTTCGACTTTGCATACCAATACCGCGATTGGGGCGGTGACGCGCTTGCGGGATATGGGGGTAGAACCGTATTTACTGTCATCGAGTTTACTGGGCGTATTAGCGCAACGCTTGGTGCGGGTGTTATGCCCCGCGTGTAAAGTACCGCTTGTACCGGATAAAACCGAACAAGCGTTTTTCCAGCGGCACACCCAAGACGTTCAAGCTATGCAGGTATTTCGCCCGGTTGGTTGCCCCGCGTGTAATCATTCCGGTTTCGTGGGGCGTGTGGGCATTTACGAAATGGTGGAAATGGACGATCACTTGCGCCAGATGATTCACGATTGCGCCAGTGAAATTCAAATGGGTGAATACGTGCATCAACATACGCCGACTTTGCGTGATGATGGTATTCGCTTGGTGTTGGAGGGCAAAACCTCACTGGATGAAGTGCTGCGCGTGACGCGGGAGGATCGCTAG
PROTEIN sequence
Length: 212
EYYIDGIGQTQVNNKVDMTFARGLRAILRQDPDVVMIGEIRDLETAEIAVQASLTGHLVFSTLHTNTAIGAVTRLRDMGVEPYLLSSSLLGVLAQRLVRVLCPACKVPLVPDKTEQAFFQRHTQDVQAMQVFRPVGCPACNHSGFVGRVGIYEMVEMDDHLRQMIHDCASEIQMGEYVHQHTPTLRDDGIRLVLEGKTSLDEVLRVTREDR*