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ar4r2_scaffold_10063_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(1376..1675)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BT10_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 99.0
  • Bit_score: 146
  • Evalue 1.90e-32
Helix-turn-helix domain protein {ECO:0000313|EMBL:EIJ34503.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 99.0
  • Bit_score: 145
  • Evalue 3.40e-32
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 101.0
  • Bit_score: 77
  • Evalue 2.30e-12

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
GTGATTACGCTGGAAGTTTTTGGTCATATGATTCGCGCTGCACGCTTGGAAAGAAAGATGCCGCAAGCCGAACTCGCAGAACGTTTGGGCGTTAGCCGCCAAACTATCAGTGCCCTCGAAAGAGGGGATGCGAAGGTGGCTGTTGGTGCGGTTTTTGAAGCAGCAACGATTGTTGGCATTCCTTTGCTGACTGACAATGCCCGTGACTTGCAACGCCTTTCTACCACCGTTGCGCACCTTGCCAGCTTGCTGCCCGAACGTGCCCGTACTGCTAAAGTGGAATTGGATAATGACTTCTAA
PROTEIN sequence
Length: 100
VITLEVFGHMIRAARLERKMPQAELAERLGVSRQTISALERGDAKVAVGAVFEAATIVGIPLLTDNARDLQRLSTTVAHLASLLPERARTAKVELDNDF*