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ar4r2_scaffold_7879_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(576..1580)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 334.0
  • Bit_score: 634
  • Evalue 1.10e-178
DNA-directed RNA polymerase subunit alpha n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWV9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 334.0
  • Bit_score: 634
  • Evalue 7.60e-179
  • rbh
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 334.0
  • Bit_score: 456
  • Evalue 8.00e-126

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGACCTCGAAAACAACAGAATTGCTGAAGCCGCGCAACGTTCAAGTGCAAGAGGCAGGTTTAAACACCTTCCGCATTACGCTTGAGCCGTTGGAGCGTGGCTTCGGTCACACGTTAGGTAATGCGTTACGTCGTATTCTGCTGTCCTCTATTCCGGGCAGTGCGATTACCGAAGTACAAATTGCTGGCGTGGTACATGAGTACACCAGTATTGAAGGTGTGCAAGAAGACGTGGTTGAGATTCTGTTGAATCTCAAAAAGTTGGCGATTCGTTTGAATGCGCGTGACGAAGCCACCTTAACTTTGAAAAAGAAAGGTAAGGGCGTAGTCACGGCGGCAGATATTGAACGTGATCACGATGTTGAGATCATTGATCCTTCACACGTTATTGCTCACATTACCAAAGACGATACTGAGCTGGAAATGAGCTTGACCATTACTCGTGGTCGTGGCTATCAACCGGCTTCTGTACGTCGCGGCCCGGATTCTCCAGAACTGCCATTAGGTACGTTAGTATTGGATGCTAGTTATAGCCCAATTATGCGCGTTGCTTATAACGTAGACAGTGCGCGTGTTGAACAGCGTACTGACATGGATAAATTGGTTTTGGAAATCCAAACCAATGGTTCTGTGAATGCTGAAGAATCCATCGGTATGGCGGCGCAGATTCTGCAACAACAGTTGGCGGTTTTCTTTGATCTGCGGATTGAAGAGCCGGTACGCCGTGAAGAGTCACAACCAGAAATCGACCCAATTTTATTGCGGCCGGTAGATGATTTGGAACTCACTGTGCGTTCAGCTAACTGTTTGAAAGCAGAGAACCTGTTCTATATTGGTGATCTGGTGCAGCGTACTGAAACTGAGTTGCTGAAAACACCGAATCTGGGCAAGAAGTCCCTGACCGAAATTAAAGATGTGCTTGCACAGCATGGTTTGACTTTGGGAACCAAGTTAGATAACTGGCCACCTGCAGGTCTTGATCACCGTGAAAGCAAAGTGGCTTAA
PROTEIN sequence
Length: 335
MTSKTTELLKPRNVQVQEAGLNTFRITLEPLERGFGHTLGNALRRILLSSIPGSAITEVQIAGVVHEYTSIEGVQEDVVEILLNLKKLAIRLNARDEATLTLKKKGKGVVTAADIERDHDVEIIDPSHVIAHITKDDTELEMSLTITRGRGYQPASVRRGPDSPELPLGTLVLDASYSPIMRVAYNVDSARVEQRTDMDKLVLEIQTNGSVNAEESIGMAAQILQQQLAVFFDLRIEEPVRREESQPEIDPILLRPVDDLELTVRSANCLKAENLFYIGDLVQRTETELLKTPNLGKKSLTEIKDVLAQHGLTLGTKLDNWPPAGLDHRESKVA*