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ar4r2_scaffold_12042_3

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 2568..3362

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=870187 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 265.0
  • Bit_score: 442
  • Evalue 4.70e-121
Transcription-repair-coupling factor n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQL0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 265.0
  • Bit_score: 442
  • Evalue 3.30e-121
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 262.0
  • Bit_score: 293
  • Evalue 7.10e-77

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGTCTGTATTGCTCAAGCCCCAATTCCCCGCCGCTCCCAACGGTCACATCCGCTGGGGGCAATTGTATGGCGCATCCCTCGACTGGCTGATTGCCCAATCCGCCCAAGGCTTTGATGGTTTGACCCTGTTGGTCGTGCCGGATGTGCATACCGCCTACCAGATGGAATCCGCACTACATTTTTTCGCACCGGAAATCCCACGTCACATTTTCCCGGATTGGGAAACCCTGCCCTACGACGTGTTTTCGCCGCACGAAGACATTATTTCCGAACGCCTGAAAACGCTGGCGACGCTGCAAAACCTGAAACGTGGCATCCTGATTGTGCCAGCCACCACACTCTTACATCGGTTAGCACCCACCAGTTATGTGCATGGTTACACCTTCATGGTGCGCAAAGGTTCGCCGCTCAATATCGACAAACTGCGCAAGCAACTCGAAGAAGCAGGCTACCGCAACGTCAGTCAGGTGATGGCGCATGGCGAATACGCTACCCGTGGTTCGCTGGTCGATTTGTTCCCGATGGGCAGCCAGACGCCCTATCGCATTGATTTGTTCGACGAGGAAATCGACTCGATCCGCACGTTCAACCCGGAAACGCAGCGGACAGATATGGTGGTGGATACCATTGAGTTGCTACCAGCGCGGGAATTTCCGCTGGATGAAGCCGGAATCCGTACCTTCCGCCAGAATTACCGGGCGCAAGTCGAAGGCGATTTGACCCGCAGCCGCATTTACGAAGGCGTGAGTCAGGGCAAGCTGCCAGCGGGGATTGAATATTACTTGCCGCTGTTC
PROTEIN sequence
Length: 265
MSVLLKPQFPAAPNGHIRWGQLYGASLDWLIAQSAQGFDGLTLLVVPDVHTAYQMESALHFFAPEIPRHIFPDWETLPYDVFSPHEDIISERLKTLATLQNLKRGILIVPATTLLHRLAPTSYVHGYTFMVRKGSPLNIDKLRKQLEEAGYRNVSQVMAHGEYATRGSLVDLFPMGSQTPYRIDLFDEEIDSIRTFNPETQRTDMVVDTIELLPAREFPLDEAGIRTFRQNYRAQVEGDLTRSRIYEGVSQGKLPAGIEYYLPLF