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ar4r2_scaffold_6097_7

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: 5588..5989

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQG0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 133.0
  • Bit_score: 221
  • Evalue 4.70e-55
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 133.0
  • Bit_score: 221
  • Evalue 6.60e-55
dksA; transcriptional regulator TraR/DksA family similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 132.0
  • Bit_score: 180
  • Evalue 2.60e-43

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGACGGAAGCTGAATTACTGGCGATGTCGCCAGAAGATTACATGAATGCGCAGCAACTGGCTTTCTTTCGGGGCATCTTGCTGAACATGAAAAACGCAATTCTGGAGCGCGGCGAAGAGACCATGCAATCCTTGCGTGAGAGCGAATTGCTGCCCGACCCAGCAGATCAAGCCACGCTAGAAGAAGAACATGTACTGGAATTGCGTACCCGTGACCGCGAGCGCAAATTGCTGAAAAAGATCAATGAGGCGTTGGAACGCCTGGACAACGGCAACTACGGGTATTGTGAGGAAACCGGTGAGCCGATTGGTTTGCCACGTTTGCTGGCACGCCCGACGGCAACCTTGAGTCTGGAAGCGCAAGCCCACCGTGAAATCCAGCAGCGGCAGTTTTCGGGGTAA
PROTEIN sequence
Length: 134
MTEAELLAMSPEDYMNAQQLAFFRGILLNMKNAILERGEETMQSLRESELLPDPADQATLEEEHVLELRTRDRERKLLKKINEALERLDNGNYGYCEETGEPIGLPRLLARPTATLSLEAQAHREIQQRQFSG*