ggKbase home page

ar4r2_scaffold_9366_3

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(817..1287)

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWD9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 44.5
  • Coverage: 173.0
  • Bit_score: 142
  • Evalue 3.20e-31
Integral membrane protein {ECO:0000313|EMBL:EIJ35682.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thi similarity UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 173.0
  • Bit_score: 142
  • Evalue 4.50e-31
integral membrane protein similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 168.0
  • Bit_score: 96
  • Evalue 9.80e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGCTGCAACGTTATTACTTTCCGCTGCTATTCAGTGCTTGCCTGCTCATGTTACAACCTTGGCAGGAATCGCTATTATTCCAGCGCAACCTGATTGATGCGGGGCAAGTATGGCGGTTGTGGACAGGCAACCTGATCCACACCAATGGCTGGCACTTGGGGTTAAATCTTGGCGGTTTTTGGTTGCTGATAGGGTTGCAACAAATAGCGGCGACACCGCGTACCCTGCTTTCACAAATACTCTTCATTGGCACGGGTGTTGGCTTGGGGCTATGGTTTTTCTCACCGCAAGTTGCGTGGTATGCGGGCTTTTCCGTTGGCATTGGTGGTAAAACCGTGTGGGACTGGCTACACAATGGCGCAGGCGTAACCGCGCAATGGATCGACGCACCGGTAATTTACGCCGCACATTTTTACGGCATGGGCAGTGGTCTAGTGCTCGCATTACTGCCTGCACCGCGTACACCCTAA
PROTEIN sequence
Length: 157
MLQRYYFPLLFSACLLMLQPWQESLLFQRNLIDAGQVWRLWTGNLIHTNGWHLGLNLGGFWLLIGLQQIAATPRTLLSQILFIGTGVGLGLWFFSPQVAWYAGFSVGIGGKTVWDWLHNGAGVTAQWIDAPVIYAAHFYGMGSGLVLALLPAPRTP*