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ar4r2_scaffold_7457_4

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 8 ASCG 12 / 38 MC: 4
Location: comp(2971..3636)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 221.0
  • Bit_score: 352
  • Evalue 5.30e-94
Pseudouridine synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BS19_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 221.0
  • Bit_score: 352
  • Evalue 3.80e-94
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 222.0
  • Bit_score: 244
  • Evalue 3.20e-62

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGCGTTTAGATCAATTTGTCAGTCAAGCCAGCGGTATTCCCCGTTCCGAAACCCCTAAACTGATTCGGGCGGGGCGTGTAAGCGTTAATGGTGTGGCGTTGCGTAAAGCCTCCACCCACATCGACCCGACGGCGCAAGTGTTGTTCGACGCTGAGCCGTTAAGTTTACCCGGTTCGATTTATCTGATGTTACACAAGCCCGCTGGGGTGATTAGTGCCACCGAAGACCCGTCACACCGCACCGTGCTGGATTTGATTGACCACCCGCACCGCCACACTTTGCACGTGGTGGTGCGGCTCGACAAAGACACCACGGGCTTGTTGCTGATTACCAACGACGGCGAGTGGTCACATCGGTTGATGTCGCCCAAACACCACATCCCCAAAACTTATTTGGCAAGCTTGGCAGAGCCGCTGACGCAATCCGCCGCACAACAATTGCGCGATGGAGTGCAACTGCACGGCGAAAAACACCTGACACAACCCGCTACCGTTGAGGTTTTACCTGAGCAACAAGTACGGATTACGATCCATGAGGGTAAATACCATCAGGTGAAACGGATGTTCGCAGCGGTGGGTAATCGTGTCGAAGCTTTACACCGTGAGCGCGTAGGAGAGTGGGAGCTTGATGCTACGCTGCAACCGGGTGAGTGGCGGGTGTTGTGA
PROTEIN sequence
Length: 222
MRLDQFVSQASGIPRSETPKLIRAGRVSVNGVALRKASTHIDPTAQVLFDAEPLSLPGSIYLMLHKPAGVISATEDPSHRTVLDLIDHPHRHTLHVVVRLDKDTTGLLLITNDGEWSHRLMSPKHHIPKTYLASLAEPLTQSAAQQLRDGVQLHGEKHLTQPATVEVLPEQQVRITIHEGKYHQVKRMFAAVGNRVEALHRERVGEWELDATLQPGEWRVL*